Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
MT-ND1P03886 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MT-ND1P03886 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MT-ND1P03886 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
MT-ND1P03886 NFU1P1-201ENST00000413128 774 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 PTPN2P1-201ENST00000423212 1072 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AL157884.1-201ENST00000424561 454 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AL354707.3-201ENST00000427308 331 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AL590399.2-201ENST00000427536 309 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 RPS10P14-201ENST00000440748 502 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AL354872.1-201ENST00000456361 967 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 EIF3LP2-201ENST00000457262 807 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
MT-ND1P03886 RN7SL70P-201ENST00000478322 302 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC073648.3-201ENST00000504939 925 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC026956.1-201ENST00000558741 396 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.84□□□□□ -1.47
MT-ND1P03886 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AP001267.4-201ENST00000602598 545 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC114477.1-201ENST00000605097 605 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC004890.3-201ENST00000605566 1095 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AC006924.1-201ENST00000610750 559 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 MIR6085-201ENST00000618314 110 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC027506.1-201ENST00000621395 198 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.84□□□□□ -1.47
MT-ND1P03886 AP001153.1-201ENST00000641024 338 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
MT-ND1P03886 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MT-ND1P03886 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
MT-ND1P03886 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MT-ND1P03886 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
MT-ND1P03886 CDY11P-201ENST00000447168 1651 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 BX284613.1-201ENST00000452221 1641 ntBASIC5.84□□□□□ -1.47
MT-ND1P03886 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
MT-ND1P03886 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.84□□□□□ -1.48
MT-ND1P03886 MSL3P1-202ENST00000440028 1468 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 OFD1P17-201ENST00000437639 3018 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC140134.1-201ENST00000511830 3544 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC026310.1-201ENST00000396004 378 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AL589794.1-201ENST00000424971 390 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 VN1R53P-201ENST00000429536 957 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AL365220.1-201ENST00000432923 399 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC009244.1-201ENST00000450566 258 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AKR1D1P1-201ENST00000457236 936 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 RPS26P24-201ENST00000497656 331 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC112184.1-201ENST00000505179 312 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC008868.1-201ENST00000509786 737 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.83□□□□□ -1.48
MT-ND1P03886 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC092718.4-201ENST00000566639 716 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC090286.3-201ENST00000573133 187 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 RN7SL475P-201ENST00000583379 298 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.83□□□□□ -1.48
MT-ND1P03886 NPIPB1P-202ENST00000588786 828 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC012175.1-201ENST00000603755 531 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 AC073046.2-201ENST00000604756 527 ntBASIC5.83□□□□□ -1.48
MT-ND1P03886 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.83□□□□□ -1.48
MT-ND1P03886 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
MT-ND1P03886 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
MT-ND1P03886 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.83□□□□□ -1.48
MT-ND1P03886 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 Z95114.1-201ENST00000624264 14574 ntBASIC5.82□□□□□ -1.48
MT-ND1P03886 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MT-ND1P03886 KYNUP3-201ENST00000574386 1341 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms