Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 CPSF4L-201ENST00000344935 647 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 SNORA43.1-201ENST00000364863 140 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
UPK1BO75841 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 SNORA51.7-201ENST00000384171 134 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC245036.1-201ENST00000391727 309 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 RN7SKP268-201ENST00000411107 316 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC5.25□□□□□ -1.57
UPK1BO75841 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC5.25□□□□□ -1.57
UPK1BO75841 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC5.25□□□□□ -1.57
UPK1BO75841 GYG1P2-201ENST00000426437 1006 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 CRIP1P1-201ENST00000427567 185 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 MED28P4-201ENST00000433137 572 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.25□□□□□ -1.57
UPK1BO75841 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 RPL7AP71-201ENST00000451120 739 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC004692.1-201ENST00000455430 424 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 RNU6-513P-201ENST00000516104 104 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AP001782.1-202ENST00000527774 445 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 C11orf70-205ENST00000534360 520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
UPK1BO75841 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
UPK1BO75841 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
UPK1BO75841 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1BO75841 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC5.25□□□□□ -1.57
UPK1BO75841 DYNLL1P1-201ENST00000595442 269 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 AC091133.5-201ENST00000603088 301 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
UPK1BO75841 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
UPK1BO75841 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 AC073136.1-201ENST00000449426 2884 ntBASIC5.25□□□□□ -1.57
UPK1BO75841 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
UPK1BO75841 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1BO75841 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
UPK1BO75841 THAP12P9-201ENST00000503971 2360 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 AL390039.1-201ENST00000399148 611 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 GNG5P5-201ENST00000420444 220 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 IYD-207ENST00000425615 684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 RPL26P34-201ENST00000431005 451 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC096632.2-201ENST00000438139 1239 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 RN7SL72P-201ENST00000460697 269 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 RN7SL390P-201ENST00000470634 284 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 AL135933.1-201ENST00000498657 802 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 CCDC11P1-201ENST00000503137 1162 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 ENPP7P11-201ENST00000505915 627 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 GAPDHP62-201ENST00000515313 990 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC090424.1-201ENST00000535243 736 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 AC009729.1-201ENST00000548873 1133 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1BO75841 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1BO75841 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1BO75841 AL031777.2-201ENST00000611953 196 ntBASIC5.24□□□□□ -1.57
UPK1BO75841 ELMO2P1-202ENST00000614283 794 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms