Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.52□□□□□ -1.37
RAI2Q9Y5P3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL359694.2-201ENST00000567753 1615 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC062029.1-202ENST00000606164 3651 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC005618.1-201ENST00000606901 3148 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 RNA5SP333-201ENST00000363466 118 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 RNA5SP334-201ENST00000364825 118 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 RN7SKP81-201ENST00000365603 331 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 SNORA77.2-201ENST00000408571 112 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CHEK2P5-201ENST00000423877 246 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 GTF3AP6-201ENST00000432585 986 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 MTND2P31-201ENST00000512602 616 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC073581.1-201ENST00000519036 575 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC124891.1-201ENST00000536322 519 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC073046.2-201ENST00000604756 527 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL136295.6-201ENST00000610486 658 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL132640.3-201ENST00000630473 177 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC007406.5-201ENST00000570140 3170 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AL353743.3-201ENST00000442109 1468 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CDY5P-201ENST00000411487 1580 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CDY9P-201ENST00000451397 1580 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 PABPC1P8-201ENST00000452851 2086 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 LINC01613-201ENST00000561476 2780 ntBASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
RAI2Q9Y5P3 AC112243.1-201ENST00000623949 3851 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 AC011455.2-201ENST00000599320 3336 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 CDY10P-201ENST00000452415 1567 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 RNA5SP485-201ENST00000365053 119 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 MIR937-201ENST00000401271 86 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 AC104843.2-201ENST00000427666 297 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 NFYAP1-201ENST00000431953 972 ntBASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.5□□□□□ -1.37
RAI2Q9Y5P3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms