Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC245036.1-201ENST00000391727 309 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RNA5SP155-201ENST00000411154 129 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 CBX1P3-201ENST00000413296 527 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RNU7-157P-201ENST00000459600 66 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SL267P-201ENST00000485107 261 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 MTCO1P55-201ENST00000489829 745 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC112184.1-201ENST00000505179 312 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 OR4H6P-201ENST00000563771 921 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 MIR3189-201ENST00000578735 73 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 RPL7AP69-201ENST00000595306 806 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AL591222.2-201ENST00000604443 754 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC010809.3-201ENST00000621310 641 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC091059.2-201ENST00000623355 614 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC135068.11-201ENST00000636378 921 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 NAMPTP1-201ENST00000440465 2514 ntBASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.55□□□□□ -1.52
RHBDD3Q9Y3P4 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AP000432.2-201ENST00000624164 2048 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC010894.1-201ENST00000313760 361 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SKP237-201ENST00000364663 301 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 HMGA1P8-201ENST00000414130 321 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RPL23AP18-201ENST00000416139 468 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RPS17P17-201ENST00000419392 409 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC092967.1-201ENST00000449016 481 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 VN1R38P-201ENST00000450265 887 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SL221P-201ENST00000466190 281 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SL790P-201ENST00000474043 298 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC093870.1-201ENST00000506837 213 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AP001804.1-201ENST00000526868 919 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 BCAS2P1-201ENST00000528022 632 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 NIFKP4-201ENST00000567275 1192 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC090286.3-201ENST00000573133 187 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 RNU6-84P-201ENST00000607737 102 ntBASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.54□□□□□ -1.52
RHBDD3Q9Y3P4 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms