Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC093824.1-201ENST00000508796 343 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 snoU109.6-201ENST00000516831 118 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 MAFA-AS1-201ENST00000519762 417 ntTSL 2 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AP003692.1-201ENST00000521706 796 ntTSL 5 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 PROSER3-206ENST00000536950 1266 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC087321.1-201ENST00000539105 460 ntTSL 3 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC073651.2-201ENST00000544148 660 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC100836.1-201ENST00000557426 877 ntTSL 3 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 MIR3913-1-201ENST00000577744 102 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC009977.1-201ENST00000586015 570 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AL445223.1-201ENST00000595998 1051 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 Metazoa_SRP.142-201ENST00000612810 316 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 Metazoa_SRP.92-201ENST00000613789 329 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC006338.1-201ENST00000618453 749 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 FO538757.2-201ENST00000624431 570 ntBASIC10.21□□□□□ -0.77
RTN4Q9NQC3 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
RTN4Q9NQC3 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 AC008543.2-201ENST00000436907 1383 ntBASIC10.21□□□□□ -0.78
RTN4Q9NQC3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 HSPD1P8-201ENST00000400121 1658 ntBASIC10.21□□□□□ -0.78
RTN4Q9NQC3 CR848007.1-201ENST00000442354 1699 ntBASIC10.21□□□□□ -0.78
RTN4Q9NQC3 AC011008.2-201ENST00000624866 3352 ntBASIC10.21□□□□□ -0.78
RTN4Q9NQC3 AC118282.4-201ENST00000623090 1712 ntBASIC10.21□□□□□ -0.78
RTN4Q9NQC3 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 SMAD2-205ENST00000586040 1971 ntTSL 5 BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC10.21□□□□□ -0.78
RTN4Q9NQC3 ZNF138-202ENST00000359735 2679 ntTSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 PANX3-201ENST00000284288 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL353662.2-201ENST00000372214 645 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RN7SKP252-201ENST00000411210 327 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 NPM1P4-201ENST00000414095 812 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CCDC58P2-201ENST00000417131 366 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL121878.1-201ENST00000418638 859 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL357556.1-201ENST00000421884 1388 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 Z98048.1-201ENST00000424746 491 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC009965.2-201ENST00000425328 970 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC121158.1-201ENST00000425645 239 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CSF2RA-209ENST00000432318 1940 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CICP22-201ENST00000432801 1319 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 BECN1-202ENST00000438274 1569 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 PPP1R2P2-201ENST00000440405 613 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RFTN1P1-201ENST00000442584 1033 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 GDI2P2-201ENST00000445131 608 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC146507.1-201ENST00000468335 354 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 MRPL27-203ENST00000503633 742 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 TRMT112P1-201ENST00000505515 351 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC010608.1-201ENST00000507964 275 ntTSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 HNRNPKP1-201ENST00000510896 1379 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 GAPDHP35-201ENST00000513369 976 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 HSPA8P13-201ENST00000523715 472 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 ZNF705CP-201ENST00000530515 889 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 FTH1-207ENST00000532601 742 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL121579.1-201ENST00000555129 305 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC005670.1-201ENST00000572349 395 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RN7SL744P-201ENST00000577604 267 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC023813.4-201ENST00000607580 580 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AC022296.3-201ENST00000608823 403 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 AL031587.4-201ENST00000609265 691 ntBASIC10.2□□□□□ -0.78
RTN4Q9NQC3 RN7SL462P-201ENST00000610302 261 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms