Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 DDX10P2-201ENST00000417796 2614 ntBASIC7.21□□□□□ -1.25
SSU72Q9NP77 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.21□□□□□ -1.25
SSU72Q9NP77 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SSU72Q9NP77 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SSU72Q9NP77 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.21□□□□□ -1.25
SSU72Q9NP77 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SSU72Q9NP77 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.21□□□□□ -1.25
SSU72Q9NP77 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 IL37-205ENST00000353225 652 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 RNU6-1283P-201ENST00000365314 105 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 TSACC-202ENST00000368252 491 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 RN7SKP273-201ENST00000411392 314 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 OR13D3P-201ENST00000412501 937 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC105402.1-201ENST00000413336 545 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 RPS7P9-201ENST00000414704 586 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC004074.1-201ENST00000421810 1063 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 HIGD1AP12-201ENST00000427832 281 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 DPPA2P1-201ENST00000428060 556 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AP000936.2-201ENST00000447151 681 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC233982.1-201ENST00000451247 436 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 NDUFA5P5-201ENST00000468361 342 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 NDUFB4P12-201ENST00000513465 390 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 RNA5SP303-201ENST00000516192 130 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 RNU2-30P-201ENST00000516209 141 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 PSMC1P8-201ENST00000536820 1296 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC073896.5-201ENST00000546464 542 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 MIR5095-201ENST00000578844 88 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 LAMTOR5-AS1-205ENST00000587691 441 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC107993.1-201ENST00000591343 684 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 OR7A8P-201ENST00000595427 913 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 YTHDF2P1-201ENST00000604759 1271 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AF146191.1-201ENST00000604941 889 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 CUX2P1-201ENST00000606426 298 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC005383.1-201ENST00000622689 534 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC091932.2-201ENST00000623014 291 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC062029.1-202ENST00000606164 3651 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AL121949.2-201ENST00000403446 1548 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC005034.3-201ENST00000604845 1747 ntBASIC7.21□□□□□ -1.26
SSU72Q9NP77 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.21□□□□□ -1.26
SSU72Q9NP77 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SSU72Q9NP77 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 MTND5P24-201ENST00000438892 1767 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 CLCA3P-203ENST00000490028 2781 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 MARK2P10-201ENST00000454959 1437 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AL132640.2-201ENST00000559968 1698 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ANKRD36P1-201ENST00000344424 659 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC7.2□□□□□ -1.26
SSU72Q9NP77 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SSU72Q9NP77 AL390774.1-201ENST00000411924 246 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 CRIP1P3-201ENST00000416794 220 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 EEF1GP7-201ENST00000422983 703 ntBASIC7.2□□□□□ -1.26
SSU72Q9NP77 PNRC2P1-201ENST00000423940 420 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms