Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AL512430.4-201ENST00000603085 613 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC004805.3-201ENST00000603178 310 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC114477.1-201ENST00000605097 605 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC007204.1-201ENST00000621794 555 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AL353763.1-201ENST00000624467 1628 ntBASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CCDC50Q8IVM0 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 MIR133A2-201ENST00000347538 102 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 SNORD16-201ENST00000362803 99 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 RN7SKP17-201ENST00000411242 351 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC006509.1-201ENST00000420788 634 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC125238.2-201ENST00000430003 1440 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 RPL5P10-201ENST00000445207 894 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AL022237.1-201ENST00000446663 358 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 SAMM50P1-201ENST00000455403 1399 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AL354872.1-201ENST00000456361 967 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC090602.1-201ENST00000469695 252 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 OR9A1P-202ENST00000484361 945 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC009567.2-201ENST00000502989 349 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 RNA5SP400-201ENST00000517155 111 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC024651.2-201ENST00000562480 2098 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC133552.4-201ENST00000576103 676 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 SYPL1P2-201ENST00000582878 727 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC005702.3-201ENST00000585345 1447 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 RNA5SP439-201ENST00000617595 124 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AC027506.1-201ENST00000621395 198 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 LINC02495-203ENST00000636704 242 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 AL355488.2-201ENST00000609909 2850 ntBASIC6.63□□□□□ -1.35
CCDC50Q8IVM0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 RPL31P11-201ENST00000426558 1558 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 MED28P4-201ENST00000433137 572 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL020997.1-201ENST00000446554 349 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL079303.1-201ENST00000486611 463 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AP004607.5-201ENST00000532034 217 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 CHEK2P2-201ENST00000554701 672 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 OR4C49P-201ENST00000563891 900 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AC068408.1-201ENST00000577406 1144 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 MIR6849-201ENST00000618543 69 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 AC063952.1-203ENST00000634410 658 ntBASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCDC50Q8IVM0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms