Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC027673.1-201ENST00000456245 405 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 RBMY2EP-202ENST00000456360 940 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC020779.1-201ENST00000478757 796 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC108120.1-201ENST00000506543 991 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 GOLGA5P1-201ENST00000507317 980 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC034244.1-201ENST00000507687 207 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 CHCHD2P7-201ENST00000508008 452 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 RNU6-720P-201ENST00000516363 108 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC103833.1-201ENST00000517442 172 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC079064.1-201ENST00000528365 362 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF43Q68DV7 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AP005205.1-201ENST00000563503 508 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC135628.1-201ENST00000568867 534 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC116651.1-201ENST00000609724 556 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC079395.2-201ENST00000610982 737 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AL354976.1-201ENST00000613843 387 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
RNF43Q68DV7 AC091965.5-201ENST00000624785 342 ntBASIC7.65□□□□□ -1.18
RNF43Q68DV7 AL160396.1-201ENST00000637433 575 ntTSL 4 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
RNF43Q68DV7 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF43Q68DV7 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF43Q68DV7 AC138915.4-201ENST00000565549 4147 ntBASIC7.65□□□□□ -1.19
RNF43Q68DV7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
RNF43Q68DV7 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF43Q68DV7 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
RNF43Q68DV7 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
RNF43Q68DV7 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 RN7SKP23-201ENST00000625159 4301 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 ZNF840P-201ENST00000504759 1996 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC012020.1-201ENST00000624541 1728 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 YES1P1-201ENST00000418510 1628 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL136298.2-201ENST00000556497 1570 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 OR4C1P-202ENST00000641065 1569 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 DDX18P5-201ENST00000534547 1306 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC023886.2-201ENST00000321285 411 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 Y_RNA.3-201ENST00000362331 103 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL451046.1-201ENST00000406097 534 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 FCF1P9-201ENST00000412546 282 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 SETP15-201ENST00000412724 337 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL008987.1-201ENST00000415528 237 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL390840.1-201ENST00000420303 988 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 PTP4A1P5-201ENST00000420305 455 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC008753.1-201ENST00000423096 284 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL589794.1-201ENST00000424971 390 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 FO393414.1-201ENST00000428697 1184 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 Z83313.1-201ENST00000433780 718 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC084290.1-201ENST00000434995 374 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AL356121.1-201ENST00000442911 156 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 GTF2F2P2-201ENST00000445825 721 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 SCDP1-201ENST00000455244 1081 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 PPP1R2P6-201ENST00000478565 588 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 RPL7P16-201ENST00000479738 738 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC093663.2-201ENST00000484625 313 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 RPL21P42-201ENST00000488408 464 ntBASIC7.64□□□□□ -1.19
RNF43Q68DV7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC7.64□□□□□ -1.19
RNF43Q68DV7 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms