Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL23AP34-201ENST00000423483 410 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 RNF11P2-201ENST00000427702 440 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 DDX11L10-201ENST00000430178 571 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 RN7SL751P-201ENST00000473281 284 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 RN7SL861P-201ENST00000473793 285 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 RN7SL635P-201ENST00000492123 296 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC114300.1-201ENST00000502347 280 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 MTATP6P22-201ENST00000507369 598 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 CBX3P3-201ENST00000508108 532 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC079140.3-201ENST00000511111 550 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC022639.1-201ENST00000523191 573 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 MIR3689F-201ENST00000579617 66 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC022239.4-201ENST00000602626 504 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AF250324.2-201ENST00000608299 610 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC116651.1-201ENST00000609724 556 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AL139418.1-201ENST00000613613 177 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC012676.3-201ENST00000614983 479 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 AC005383.1-201ENST00000622689 534 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC073488.2-201ENST00000631903 751 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 EPS15P1-202ENST00000459691 2071 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC7.32□□□□□ -1.24
PCDH1Q08174 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.32□□□□□ -1.24
PCDH1Q08174 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.32□□□□□ -1.24
PCDH1Q08174 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 SALL4P7-201ENST00000555779 3120 ntBASIC7.32□□□□□ -1.24
PCDH1Q08174 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PCDH1Q08174 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PCDH1Q08174 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDH1Q08174 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PCDH1Q08174 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 Y_RNA.192-201ENST00000363977 102 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 LST1-211ENST00000376110 433 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 RNY3P14-201ENST00000384309 102 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 MIR498-201ENST00000385134 124 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 VDAC2P1-201ENST00000399358 958 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 CHMP1B2P-201ENST00000399581 597 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 GRIK1-AS1-202ENST00000412579 818 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC023128.2-201ENST00000420880 1223 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 GAPDHP51-201ENST00000426454 1000 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 RPL5P4-201ENST00000434805 886 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AL606752.1-201ENST00000435442 666 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 GTF3AP5-201ENST00000442645 697 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 AL512326.1-201ENST00000443050 721 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH1Q08174 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 RHEBP1-201ENST00000448647 556 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 CHIAP1-201ENST00000456220 995 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 RPL10P6-201ENST00000457497 318 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 EIF4E2P2-201ENST00000492033 736 ntBASIC7.31□□□□□ -1.24
PCDH1Q08174 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.31□□□□□ -1.24
PCDH1Q08174 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
PCDH1Q08174 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC025180.1-201ENST00000505701 595 ntTSL 4 BASIC7.31□□□□□ -1.24
PCDH1Q08174 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.31□□□□□ -1.24
PCDH1Q08174 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms