Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC4P56524 RN7SL413P-201ENST00000482700 297 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 CR383656.1-201ENST00000484916 377 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC015524.1-201ENST00000491585 472 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 AC091965.3-201ENST00000506236 208 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC4P56524 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC4P56524 AL390877.1-201ENST00000605704 214 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.73□□□□□ -1.33
HDAC4P56524 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC009779.8-202ENST00000607990 932 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 AC068213.1-201ENST00000625124 226 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 LINC02495-203ENST00000636704 242 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
HDAC4P56524 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC4P56524 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC4P56524 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 GTF2IP4-201ENST00000453092 2054 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.73□□□□□ -1.33
HDAC4P56524 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC4P56524 AC006600.2-201ENST00000624834 2506 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 AL157831.2-201ENST00000564681 3095 ntBASIC6.73□□□□□ -1.33
HDAC4P56524 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.73□□□□□ -1.33
HDAC4P56524 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HDAC4P56524 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC110373.1-201ENST00000505994 3505 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 SNORD35A-201ENST00000363389 86 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 OR5W1P-201ENST00000423705 938 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 AC002069.1-201ENST00000429649 1159 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC068491.1-201ENST00000449539 1241 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC073916.1-201ENST00000545095 130 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 AC073046.2-201ENST00000604756 527 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 AL138960.1-201ENST00000613838 513 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 AL031658.2-201ENST00000616850 651 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 MIR6085-201ENST00000618314 110 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
HDAC4P56524 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
HDAC4P56524 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 AL353743.3-201ENST00000442109 1468 ntBASIC6.72□□□□□ -1.33
HDAC4P56524 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
HDAC4P56524 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
HDAC4P56524 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HDAC4P56524 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HDAC4P56524 TMCC1P1-201ENST00000518897 1980 ntBASIC6.71□□□□□ -1.33
HDAC4P56524 MTCO1P8-201ENST00000416914 1523 ntBASIC6.71□□□□□ -1.33
HDAC4P56524 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.71□□□□□ -1.33
HDAC4P56524 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.71□□□□□ -1.33
HDAC4P56524 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HDAC4P56524 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.71□□□□□ -1.33
HDAC4P56524 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
HDAC4P56524 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HDAC4P56524 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HDAC4P56524 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HDAC4P56524 VIM2P-201ENST00000402383 1294 ntBASIC6.71□□□□□ -1.34
HDAC4P56524 RN7SKP281-201ENST00000410472 352 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms