Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SETP3-201ENST00000581726 813 ntBASIC5.96□□□□□ -1.46
CDH12P55289 NPM1P45-201ENST00000583151 559 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 AC093635.1-201ENST00000609028 555 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL137000.1-201ENST00000610528 1244 ntBASIC5.96□□□□□ -1.46
CDH12P55289 AL445649.1-201ENST00000615941 691 ntBASIC5.96□□□□□ -1.46
CDH12P55289 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CDH12P55289 AC011455.2-201ENST00000599320 3336 ntBASIC5.96□□□□□ -1.46
CDH12P55289 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CDH12P55289 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CDH12P55289 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CDH12P55289 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CDH12P55289 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CDH12P55289 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
CDH12P55289 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH12P55289 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
CDH12P55289 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH12P55289 SNORA70.9-201ENST00000384370 135 ntBASIC5.95□□□□□ -1.46
CDH12P55289 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH12P55289 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CDH12P55289 UBE2V1P14-201ENST00000415815 558 ntBASIC5.95□□□□□ -1.46
CDH12P55289 RPL23AP85-201ENST00000421838 433 ntBASIC5.95□□□□□ -1.46
CDH12P55289 HSFY1P1-201ENST00000423928 1178 ntBASIC5.95□□□□□ -1.46
CDH12P55289 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.95□□□□□ -1.46
CDH12P55289 MTCO1P57-201ENST00000432182 261 ntBASIC5.95□□□□□ -1.46
CDH12P55289 RPL17P35-201ENST00000432217 549 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH12P55289 AL158214.1-201ENST00000444423 404 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AL356133.1-201ENST00000444762 372 ntBASIC5.95□□□□□ -1.46
CDH12P55289 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH12P55289 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH12P55289 AC103563.5-201ENST00000455643 364 ntBASIC5.95□□□□□ -1.46
CDH12P55289 RPL5P14-201ENST00000494197 878 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.95□□□□□ -1.46
CDH12P55289 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 AC021146.10-201ENST00000515628 706 ntBASIC5.95□□□□□ -1.46
CDH12P55289 OR4A6P-201ENST00000534364 970 ntBASIC5.95□□□□□ -1.46
CDH12P55289 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.95□□□□□ -1.46
CDH12P55289 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.95□□□□□ -1.46
CDH12P55289 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.95□□□□□ -1.46
CDH12P55289 AC007494.1-201ENST00000562293 760 ntBASIC5.95□□□□□ -1.46
CDH12P55289 OR4H6P-201ENST00000563771 921 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC010287.1-201ENST00000566916 357 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC090286.3-201ENST00000573133 187 ntBASIC5.95□□□□□ -1.46
CDH12P55289 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 SNORD96A-201ENST00000606577 79 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 MIR8082-201ENST00000612488 81 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 AC135068.11-201ENST00000636378 921 ntBASIC5.95□□□□□ -1.46
CDH12P55289 AC074141.1-201ENST00000588129 2995 ntBASIC5.95□□□□□ -1.46
CDH12P55289 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CDH12P55289 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.95□□□□□ -1.46
CDH12P55289 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH12P55289 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CDH12P55289 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 AC007159.1-201ENST00000566529 4706 ntBASIC5.94□□□□□ -1.46
CDH12P55289 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.94□□□□□ -1.46
CDH12P55289 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CDH12P55289 PPIAP24-201ENST00000328558 471 ntBASIC5.94□□□□□ -1.46
CDH12P55289 RNA5SP478-201ENST00000364657 115 ntBASIC5.94□□□□□ -1.46
CDH12P55289 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.94□□□□□ -1.46
CDH12P55289 RNU6-883P-201ENST00000384597 107 ntBASIC5.94□□□□□ -1.46
CDH12P55289 RPL5P20-201ENST00000403848 896 ntBASIC5.94□□□□□ -1.46
CDH12P55289 AL117344.1-201ENST00000407196 616 ntBASIC5.94□□□□□ -1.46
CDH12P55289 NFU1P1-201ENST00000413128 774 ntBASIC5.94□□□□□ -1.46
CDH12P55289 HMGA1P8-201ENST00000414130 321 ntBASIC5.94□□□□□ -1.46
CDH12P55289 MRPS21P5-201ENST00000417885 231 ntBASIC5.94□□□□□ -1.46
CDH12P55289 CYP4F30P-202ENST00000420048 405 ntBASIC5.94□□□□□ -1.46
CDH12P55289 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CDH12P55289 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms