Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC083906.1-201ENST00000509298 406 ntBASIC6.92□□□□□ -1.3
VCPP55072 AC006499.4-201ENST00000510947 694 ntBASIC6.92□□□□□ -1.3
VCPP55072 AC016180.1-201ENST00000567945 403 ntBASIC6.92□□□□□ -1.3
VCPP55072 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.92□□□□□ -1.3
VCPP55072 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.92□□□□□ -1.3
VCPP55072 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 AC093635.1-201ENST00000609028 555 ntBASIC6.92□□□□□ -1.3
VCPP55072 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.92□□□□□ -1.3
VCPP55072 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.92□□□□□ -1.3
VCPP55072 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.92□□□□□ -1.3
VCPP55072 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
VCPP55072 AC007114.2-201ENST00000576014 4281 ntBASIC6.92□□□□□ -1.3
VCPP55072 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
VCPP55072 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
VCPP55072 LYARP1-201ENST00000436977 1501 ntBASIC6.91□□□□□ -1.3
VCPP55072 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 AC130360.2-201ENST00000533477 1556 ntBASIC6.91□□□□□ -1.3
VCPP55072 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
VCPP55072 CDY3P-201ENST00000454543 1618 ntBASIC6.91□□□□□ -1.3
VCPP55072 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 PPIAP24-201ENST00000328558 471 ntBASIC6.91□□□□□ -1.3
VCPP55072 RNU6-316P-201ENST00000391027 107 ntBASIC6.91□□□□□ -1.3
VCPP55072 AC003045.1-201ENST00000398779 713 ntBASIC6.91□□□□□ -1.3
VCPP55072 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 GTF3AP1-201ENST00000416942 1004 ntBASIC6.91□□□□□ -1.3
VCPP55072 TRGV5P-201ENST00000419915 354 ntBASIC6.91□□□□□ -1.3
VCPP55072 AC066692.1-201ENST00000421721 457 ntBASIC6.91□□□□□ -1.3
VCPP55072 AL354707.3-201ENST00000427308 331 ntBASIC6.91□□□□□ -1.3
VCPP55072 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.91□□□□□ -1.3
VCPP55072 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 AC108043.1-201ENST00000512696 574 ntBASIC6.91□□□□□ -1.3
VCPP55072 ZNF519P4-201ENST00000514008 125 ntBASIC6.91□□□□□ -1.3
VCPP55072 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VCPP55072 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.91□□□□□ -1.3
VCPP55072 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 BNIP3P32-201ENST00000600015 554 ntBASIC6.91□□□□□ -1.3
VCPP55072 AC008536.1-201ENST00000602872 669 ntBASIC6.91□□□□□ -1.3
VCPP55072 AC091133.5-201ENST00000603088 301 ntBASIC6.91□□□□□ -1.3
VCPP55072 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 AC100767.2-201ENST00000604840 693 ntBASIC6.91□□□□□ -1.3
VCPP55072 AC114477.1-201ENST00000605097 605 ntBASIC6.91□□□□□ -1.3
VCPP55072 AP001437.1-201ENST00000608783 456 ntBASIC6.91□□□□□ -1.3
VCPP55072 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.91□□□□□ -1.3
VCPP55072 MIR6826-201ENST00000617808 98 ntBASIC6.91□□□□□ -1.3
VCPP55072 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VCPP55072 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.91□□□□□ -1.3
VCPP55072 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 PSMC1P6-201ENST00000477233 1319 ntBASIC6.91□□□□□ -1.3
VCPP55072 PSMC1P4-201ENST00000515236 1327 ntBASIC6.91□□□□□ -1.3
VCPP55072 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.91□□□□□ -1.3
VCPP55072 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VCPP55072 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.91□□□□□ -1.3
VCPP55072 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.91□□□□□ -1.3
VCPP55072 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VCPP55072 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VCPP55072 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VCPP55072 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
VCPP55072 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VCPP55072 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VCPP55072 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VCPP55072 SLC20A1P1-201ENST00000413906 956 ntBASIC6.9□□□□□ -1.3
VCPP55072 MARK2P12-201ENST00000420129 585 ntBASIC6.9□□□□□ -1.3
VCPP55072 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 AL139415.1-201ENST00000424862 352 ntBASIC6.9□□□□□ -1.3
VCPP55072 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.9□□□□□ -1.3
VCPP55072 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.9□□□□□ -1.3
VCPP55072 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.9□□□□□ -1.3
VCPP55072 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.9□□□□□ -1.3
VCPP55072 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.9□□□□□ -1.3
VCPP55072 AC068228.1-201ENST00000461723 211 ntBASIC6.9□□□□□ -1.3
VCPP55072 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.9□□□□□ -1.3
VCPP55072 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms