Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL645939.3-201ENST00000435408 225 ntBASIC5.6□□□□□ -1.51
SRP9P49458 RN7SL393P-201ENST00000463588 296 ntBASIC5.6□□□□□ -1.51
SRP9P49458 RN7SL83P-201ENST00000468131 297 ntBASIC5.6□□□□□ -1.51
SRP9P49458 RPL23AP64-201ENST00000469465 435 ntBASIC5.6□□□□□ -1.51
SRP9P49458 SNRPCP3-201ENST00000474888 476 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AC022415.1-202ENST00000486612 523 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AC131392.1-201ENST00000506490 633 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.6□□□□□ -1.51
SRP9P49458 OR4A40P-201ENST00000533878 948 ntBASIC5.6□□□□□ -1.51
SRP9P49458 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.6□□□□□ -1.51
SRP9P49458 OR4H6P-201ENST00000563771 921 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.6□□□□□ -1.51
SRP9P49458 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.6□□□□□ -1.51
SRP9P49458 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.6□□□□□ -1.51
SRP9P49458 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.6□□□□□ -1.51
SRP9P49458 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SRP9P49458 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SRP9P49458 AC022164.1-201ENST00000568767 2673 ntBASIC5.6□□□□□ -1.51
SRP9P49458 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 DNM1P47-203ENST00000571780 12667 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 MSL3P1-202ENST00000440028 1468 ntBASIC5.59□□□□□ -1.51
SRP9P49458 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.59□□□□□ -1.51
SRP9P49458 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 PPIAP24-201ENST00000328558 471 ntBASIC5.59□□□□□ -1.51
SRP9P49458 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SRP9P49458 RNA5SP350-201ENST00000363298 111 ntBASIC5.59□□□□□ -1.51
SRP9P49458 MRPS6P2-201ENST00000381143 370 ntBASIC5.59□□□□□ -1.51
SRP9P49458 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SRP9P49458 RPL23AP17-201ENST00000401064 499 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.59□□□□□ -1.51
SRP9P49458 AC092651.1-201ENST00000426110 312 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC003989.1-201ENST00000434569 565 ntBASIC5.59□□□□□ -1.51
SRP9P49458 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.59□□□□□ -1.51
SRP9P49458 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 CEACAMP11-201ENST00000455211 583 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC103563.5-201ENST00000455643 364 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC236972.4-201ENST00000458091 963 ntBASIC5.59□□□□□ -1.51
SRP9P49458 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 MRPS5P3-201ENST00000515577 166 ntBASIC5.59□□□□□ -1.51
SRP9P49458 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.59□□□□□ -1.51
SRP9P49458 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.59□□□□□ -1.51
SRP9P49458 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SRP9P49458 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.59□□□□□ -1.51
SRP9P49458 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.59□□□□□ -1.51
SRP9P49458 AC092718.4-201ENST00000566639 716 ntBASIC5.59□□□□□ -1.51
SRP9P49458 OOSP1P2-201ENST00000579644 351 ntBASIC5.59□□□□□ -1.51
SRP9P49458 SYPL1P2-201ENST00000582878 727 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC114477.1-201ENST00000605097 605 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC116165.3-201ENST00000614524 400 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AL445649.1-201ENST00000615941 691 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC018692.2-201ENST00000624130 348 ntBASIC5.59□□□□□ -1.51
SRP9P49458 AC114546.4-201ENST00000624413 369 ntBASIC5.59□□□□□ -1.51
SRP9P49458 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.59□□□□□ -1.51
SRP9P49458 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.59□□□□□ -1.51
SRP9P49458 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SRP9P49458 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SRP9P49458 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.59□□□□□ -1.52
SRP9P49458 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SRP9P49458 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SRP9P49458 BIN2P1-201ENST00000504996 1530 ntBASIC5.58□□□□□ -1.52
SRP9P49458 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.58□□□□□ -1.52
SRP9P49458 AL359976.1-201ENST00000418655 3528 ntBASIC5.58□□□□□ -1.52
SRP9P49458 AC023245.2-201ENST00000530760 2978 ntBASIC5.58□□□□□ -1.52
SRP9P49458 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SRP9P49458 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SRP9P49458 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.58□□□□□ -1.52
SRP9P49458 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SRP9P49458 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SRP9P49458 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SRP9P49458 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SRP9P49458 AC140134.1-201ENST00000511830 3544 ntBASIC5.58□□□□□ -1.52
SRP9P49458 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.58□□□□□ -1.52
SRP9P49458 AL049634.1-201ENST00000453770 1720 ntBASIC5.58□□□□□ -1.52
SRP9P49458 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.58□□□□□ -1.52
SRP9P49458 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.58□□□□□ -1.52
SRP9P49458 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.58□□□□□ -1.52
SRP9P49458 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SRP9P49458 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms