Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 AL390877.1-201ENST00000605704 214 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 MIR6503-201ENST00000622884 86 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 OR7E91P-202ENST00000642062 1198 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
SDCBPO00560 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.27□□□□□ -1.57
SDCBPO00560 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SDCBPO00560 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 SNORD35A-201ENST00000363389 86 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.26□□□□□ -1.57
SDCBPO00560 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SDCBPO00560 AC015977.1-201ENST00000418887 292 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.26□□□□□ -1.57
SDCBPO00560 MED28P4-201ENST00000433137 572 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 AL034369.1-201ENST00000453808 477 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 AC112187.1-201ENST00000455837 479 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 AC073594.1-201ENST00000462065 364 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
SDCBPO00560 MTCO1P55-201ENST00000489829 745 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 AC008945.1-201ENST00000505144 499 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.26□□□□□ -1.57
SDCBPO00560 RNA5SP96-201ENST00000516041 107 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.26□□□□□ -1.57
SDCBPO00560 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 AC084851.2-201ENST00000530377 364 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.26□□□□□ -1.57
SDCBPO00560 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SDCBPO00560 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.26□□□□□ -1.57
SDCBPO00560 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.26□□□□□ -1.57
SDCBPO00560 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.26□□□□□ -1.57
SDCBPO00560 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.26□□□□□ -1.57
SDCBPO00560 AC006924.1-201ENST00000610750 559 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.26□□□□□ -1.57
SDCBPO00560 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.26□□□□□ -1.57
SDCBPO00560 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 AC068213.1-201ENST00000625124 226 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 HDAC1P2-201ENST00000453661 1398 ntBASIC5.26□□□□□ -1.57
SDCBPO00560 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SDCBPO00560 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.26□□□□□ -1.57
SDCBPO00560 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC020656.2-201ENST00000613291 5309 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 RNA5SP514-201ENST00000363717 111 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AL445238.1-204ENST00000400311 463 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AL033519.1-201ENST00000407266 307 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC021876.1-201ENST00000425959 359 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC083862.1-201ENST00000427378 1242 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC063955.1-201ENST00000462872 685 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SDCBPO00560 RN7SL83P-201ENST00000468131 297 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 RN7SL502P-201ENST00000481857 290 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AL035690.1-201ENST00000490892 383 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC139713.1-202ENST00000512366 460 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SDCBPO00560 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 TPRX1P1-201ENST00000557620 319 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 MIR4732-201ENST00000581873 76 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC024267.2-201ENST00000582737 417 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC027229.1-201ENST00000583887 253 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.25□□□□□ -1.57
SDCBPO00560 NPIPB1P-202ENST00000588786 828 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AL589863.1-201ENST00000595383 631 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SDCBPO00560 AL008582.1-201ENST00000609612 442 ntBASIC5.25□□□□□ -1.57
SDCBPO00560 AL589743.6-201ENST00000611025 117 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms