Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 MAPK10-261ENST00000641050 3109 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 RNU4-23P-201ENST00000362839 140 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 RNA5SP65-201ENST00000363166 119 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 MTND4LP17-201ENST00000414607 293 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 CRYGGP-201ENST00000443337 145 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 RN7SL552P-201ENST00000462094 276 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 RN7SL39P-201ENST00000462264 297 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AP004607.6-201ENST00000525033 1202 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC110056.1-201ENST00000525759 911 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC134669.1-201ENST00000581275 672 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AL589765.6-201ENST00000601909 549 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC079315.1-201ENST00000602952 623 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 uc_338.31-201ENST00000615595 186 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 MIR6721-201ENST00000617181 87 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 MIR6861-201ENST00000618657 64 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AC079949.2-201ENST00000617117 2933 ntBASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.09□□□□□ -1.27
SSX2IPQ9Y2D8 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
SSX2IPQ9Y2D8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC020978.6-201ENST00000571197 3177 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 STAG3L4-201ENST00000352103 530 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 YWHAZP4-201ENST00000392459 708 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL391419.1-201ENST00000398901 1275 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 RNU2-72P-201ENST00000411175 163 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 VN1R20P-201ENST00000425215 966 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 RPS10P18-201ENST00000442662 495 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 SULT1D1P-201ENST00000458020 882 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 MTND3P3-201ENST00000505004 126 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 MTND1P36-201ENST00000522384 936 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 CYCSP25-201ENST00000525280 316 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL845552.1-201ENST00000556820 323 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AP003115.1-201ENST00000569849 463 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 AL589863.1-201ENST00000595383 631 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 SMIM12P1-201ENST00000603004 274 ntBASIC7.08□□□□□ -1.28
SSX2IPQ9Y2D8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms