Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL050305.1-201ENST00000399993 1230 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 OR1F12-201ENST00000402365 945 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL451046.1-201ENST00000406097 534 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL929472.1-201ENST00000417484 429 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 SPATA20P1-201ENST00000423089 438 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 ETF1P1-206ENST00000427296 984 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC003989.1-201ENST00000434569 565 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 OR52U1P-201ENST00000439752 923 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 SEPT14P12-201ENST00000442280 560 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL353803.3-201ENST00000444641 335 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 RPS15AP29-201ENST00000445539 400 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC009963.4-201ENST00000448535 339 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 CBX5P1-201ENST00000468470 561 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 CR383656.1-201ENST00000484916 377 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC010409.2-201ENST00000505780 478 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 MRPL57P6-201ENST00000506570 309 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 HNRNPCP8-201ENST00000528764 888 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SETP17-201ENST00000534163 817 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 PSMC1P8-201ENST00000536820 1296 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC126323.4-201ENST00000566935 234 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC091932.1-201ENST00000569381 427 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 MIR6726-201ENST00000613751 61 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 MIR7854-201ENST00000620068 65 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC011455.2-201ENST00000599320 3336 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC110373.1-201ENST00000505994 3505 ntBASIC5.81□□□□□ -1.48
SHFQ7M4L6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHFQ7M4L6 AC093844.1-201ENST00000514910 1361 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 RNU6-386P-201ENST00000362650 107 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 RNA5SP321-201ENST00000362722 111 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 RNU6-883P-201ENST00000384597 107 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 MIR7-1-201ENST00000384871 110 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL139039.2-201ENST00000407436 479 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 RN7SKP161-201ENST00000411110 305 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL359092.1-201ENST00000417156 265 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC091492.1-201ENST00000419844 272 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 OR5W1P-201ENST00000423705 938 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL590762.3-201ENST00000436372 640 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 MARK2P8-201ENST00000476069 952 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC010442.1-201ENST00000515583 816 ntBASIC5.8□□□□□ -1.48
SHFQ7M4L6 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.8□□□□□ -1.48
SHFQ7M4L6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms