Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 RPL23AP18-201ENST00000416139 468 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC128677.1-201ENST00000436016 442 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 CCNJP2-201ENST00000457810 1163 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AP003385.3-201ENST00000472498 287 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC131392.1-201ENST00000506490 633 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AL133399.1-201ENST00000527476 298 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC004805.3-201ENST00000603178 310 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC010998.3-201ENST00000613871 631 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AL445649.1-201ENST00000615941 691 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AC107905.1-201ENST00000616204 426 ntBASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NHLRC1Q6VVB1 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AL353743.3-201ENST00000442109 1468 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 Z83820.1-201ENST00000456978 1499 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC067942.1-201ENST00000488045 1493 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 OR7E25P-201ENST00000344844 931 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 RNA5SP85-201ENST00000365378 119 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 VIM2P-201ENST00000402383 1294 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 RANP6-201ENST00000413691 644 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 SETP9-201ENST00000423837 832 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AL589794.1-201ENST00000424971 390 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC092106.2-201ENST00000436597 487 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 GAPDHP37-201ENST00000442317 968 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 RPS7P11-201ENST00000484240 586 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC018645.1-201ENST00000505003 109 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 CCNHP1-201ENST00000513311 678 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 CHEK2P2-201ENST00000554701 672 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC092718.4-201ENST00000566639 716 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 RN7SL475P-201ENST00000583379 298 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AL352984.2-201ENST00000611153 546 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 U1.41-201ENST00000617626 165 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC004836.1-201ENST00000623032 634 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 AC002044.3-201ENST00000623314 541 ntBASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.78□□□□□ -1.48
NHLRC1Q6VVB1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 329.2 ms