Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 STAG3L4-201ENST00000352103 530 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 RNA5SP350-201ENST00000363298 111 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC091492.1-201ENST00000419844 272 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC007568.1-201ENST00000422912 471 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL392003.1-201ENST00000434394 243 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL355355.1-201ENST00000442900 793 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC107015.1-201ENST00000466902 747 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 RN7SL382P-201ENST00000482631 282 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 PSMA2P2-201ENST00000504319 686 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC021220.1-201ENST00000507445 630 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 RNU6-551P-201ENST00000516661 103 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 SCARNA18.2-201ENST00000516882 84 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC018442.3-201ENST00000523025 183 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 OR5M4P-201ENST00000529436 925 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 EIF4A2P5-201ENST00000529914 499 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC093278.2-201ENST00000564956 2485 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AC009237.12-201ENST00000604755 742 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AL592494.3-201ENST00000609485 464 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC5.78□□□□□ -1.48
C11orf88Q6PI97 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
C11orf88Q6PI97 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.48
C11orf88Q6PI97 MFSD8-256ENST00000641949 1640 ntBASIC5.77□□□□□ -1.48
C11orf88Q6PI97 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AL592429.1-201ENST00000403909 1473 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RNA5SP188-201ENST00000362916 129 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RNA5SP429-201ENST00000363688 109 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 MT-RNR1-201ENST00000389680 954 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC240504.1-201ENST00000395709 845 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RN7SKP254-201ENST00000410685 310 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AL161626.1-201ENST00000441480 490 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RAD1P2-201ENST00000446414 663 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 TVP23CP1-201ENST00000450317 639 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 SNRPCP3-201ENST00000474888 476 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RN7SL849P-201ENST00000485236 295 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 MTND3P6-201ENST00000485242 339 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 SEC11B-201ENST00000518383 499 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC087752.2-201ENST00000521219 281 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 RBMS2P1-201ENST00000525031 1226 ntBASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC5.77□□□□□ -1.49
C11orf88Q6PI97 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms