Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RFWD3Q6PCD5 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AL451046.1-201ENST00000406097 534 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC007568.1-201ENST00000422912 471 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AKR1B10P1-201ENST00000425765 942 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC099782.1-201ENST00000425889 474 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC108479.1-201ENST00000431142 427 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 RPL5P12-201ENST00000477071 851 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 OR4A6P-201ENST00000534364 970 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC097467.4-201ENST00000605504 141 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 MIR7109-201ENST00000613748 65 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AL591926.1-201ENST00000620542 217 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AL132640.3-201ENST00000630473 177 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AC125238.2-201ENST00000430003 1440 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 AP000641.1-201ENST00000531988 1639 ntBASIC6.58□□□□□ -1.36
RFWD3Q6PCD5 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC010168.2-201ENST00000562691 5428 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL035422.1-201ENST00000414193 397 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 RPL34P27-201ENST00000428810 349 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC112492.2-201ENST00000432774 1030 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL355355.1-201ENST00000442900 793 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 RN7SL369P-201ENST00000477138 299 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 RN7SL714P-201ENST00000487050 298 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 COX6B1P4-201ENST00000519826 484 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 NPIPB14P-203ENST00000532298 987 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC107958.1-201ENST00000556576 290 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC005332.4-201ENST00000592752 579 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL109924.4-201ENST00000623089 670 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 DOCK11P1-201ENST00000553480 5932 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AL157831.2-201ENST00000564681 3095 ntBASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
RFWD3Q6PCD5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 AC110373.1-201ENST00000505994 3505 ntBASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.56□□□□□ -1.36
RFWD3Q6PCD5 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms