Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC010401.2-201ENST00000575137 4934 ntBASIC5.53□□□□□ -1.52
UBA52P62987 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UBA52P62987 RNA5SP85-201ENST00000365378 119 ntBASIC5.53□□□□□ -1.52
UBA52P62987 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UBA52P62987 MIR1282-201ENST00000408865 101 ntBASIC5.53□□□□□ -1.52
UBA52P62987 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.53□□□□□ -1.52
UBA52P62987 AC245452.2-201ENST00000435222 392 ntBASIC5.53□□□□□ -1.52
UBA52P62987 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 AKR1D1P1-201ENST00000457236 936 ntBASIC5.53□□□□□ -1.52
UBA52P62987 OR7E22P-201ENST00000478335 1035 ntBASIC5.53□□□□□ -1.52
UBA52P62987 PFN1P8-201ENST00000497012 543 ntBASIC5.53□□□□□ -1.52
UBA52P62987 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 AC093816.1-201ENST00000515076 913 ntBASIC5.53□□□□□ -1.52
UBA52P62987 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 SETP17-201ENST00000534163 817 ntBASIC5.53□□□□□ -1.52
UBA52P62987 AC009729.1-201ENST00000548873 1133 ntBASIC5.53□□□□□ -1.52
UBA52P62987 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 ACTG1P15-201ENST00000570019 1063 ntBASIC5.53□□□□□ -1.52
UBA52P62987 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.53□□□□□ -1.52
UBA52P62987 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.53□□□□□ -1.52
UBA52P62987 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.53□□□□□ -1.52
UBA52P62987 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.53□□□□□ -1.52
UBA52P62987 WBP1LP12-201ENST00000604449 331 ntBASIC5.53□□□□□ -1.52
UBA52P62987 AC024589.2-201ENST00000605642 1294 ntBASIC5.53□□□□□ -1.52
UBA52P62987 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 AC005393.1-201ENST00000617916 584 ntBASIC5.53□□□□□ -1.52
UBA52P62987 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 AC092070.2-203ENST00000598377 3644 ntBASIC5.53□□□□□ -1.52
UBA52P62987 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.53□□□□□ -1.52
UBA52P62987 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
UBA52P62987 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UBA52P62987 NCOA4P2-201ENST00000340589 1813 ntBASIC5.53□□□□□ -1.52
UBA52P62987 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
UBA52P62987 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UBA52P62987 AL731532.1-201ENST00000623972 4236 ntBASIC5.53□□□□□ -1.52
UBA52P62987 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
UBA52P62987 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 MIR1275-201ENST00000408770 80 ntBASIC5.52□□□□□ -1.53
UBA52P62987 RN7SKP86-201ENST00000410454 332 ntBASIC5.52□□□□□ -1.53
UBA52P62987 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UBA52P62987 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UBA52P62987 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 GAPDHP37-201ENST00000442317 968 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 OR51P1P-201ENST00000447547 942 ntBASIC5.52□□□□□ -1.53
UBA52P62987 SETP4-201ENST00000455717 868 ntBASIC5.52□□□□□ -1.53
UBA52P62987 AC104339.1-201ENST00000465478 348 ntBASIC5.52□□□□□ -1.53
UBA52P62987 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.52□□□□□ -1.53
UBA52P62987 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.52□□□□□ -1.53
UBA52P62987 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.52□□□□□ -1.53
UBA52P62987 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms