Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.22□□□□□ -1.57
SPCS3P61009 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SPCS3P61009 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPCS3P61009 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.21□□□□□ -1.57
SPCS3P61009 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SPCS3P61009 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.21□□□□□ -1.57
SPCS3P61009 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
SPCS3P61009 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.21□□□□□ -1.57
SPCS3P61009 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SPCS3P61009 MTCO1P46-201ENST00000451639 1491 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SPCS3P61009 RNA5SP321-201ENST00000362722 111 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 RNA5SP478-201ENST00000364657 115 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.21□□□□□ -1.58
SPCS3P61009 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.21□□□□□ -1.58
SPCS3P61009 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SPCS3P61009 RPL23AP85-201ENST00000421838 433 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 CLIC4P3-201ENST00000422221 752 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC114402.2-201ENST00000432760 643 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC025271.1-201ENST00000485045 429 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC114728.1-201ENST00000488289 483 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC131392.1-201ENST00000506490 633 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 Z99943.2-201ENST00000507585 266 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC008429.2-201ENST00000523057 864 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC107952.1-201ENST00000524200 376 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC069240.2-201ENST00000550242 609 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC015674.1-201ENST00000578482 267 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 MIR5682-201ENST00000584864 76 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC093635.1-201ENST00000609028 555 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 MIR6762-201ENST00000613340 86 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC026333.4-201ENST00000613543 544 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AC024255.1-201ENST00000614376 102 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AL162377.2-201ENST00000624532 337 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 AL591135.1-201ENST00000401578 5914 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 SHQ1P1-201ENST00000437111 1544 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC012254.3-201ENST00000591183 2117 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SPCS3P61009 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.21□□□□□ -1.58
SPCS3P61009 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.21□□□□□ -1.58
SPCS3P61009 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SPCS3P61009 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
SPCS3P61009 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
SPCS3P61009 AL353763.1-201ENST00000624467 1628 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.2□□□□□ -1.58
SPCS3P61009 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.2□□□□□ -1.58
SPCS3P61009 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 RNA5SP427-201ENST00000365323 119 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SPCS3P61009 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.2□□□□□ -1.58
SPCS3P61009 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SPCS3P61009 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.2□□□□□ -1.58
SPCS3P61009 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SPCS3P61009 RN7SKP137-201ENST00000411074 307 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 AL662791.3-201ENST00000413771 776 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 AL359633.1-201ENST00000421403 310 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 HSPE1P16-201ENST00000426640 348 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SPCS3P61009 AL022237.1-201ENST00000446663 358 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.2□□□□□ -1.58
SPCS3P61009 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC5.2□□□□□ -1.58
SPCS3P61009 AC005165.2-201ENST00000466070 380 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 RPS16P9-201ENST00000477220 427 ntBASIC5.2□□□□□ -1.58
SPCS3P61009 RPL5P22-201ENST00000480199 884 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms