Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 U91328.4-201ENST00000608919 517 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 AL138693.1-201ENST00000622219 129 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AC020923.1-201ENST00000624021 917 ntBASIC6.96□□□□□ -1.3
COPB1P53618 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.96□□□□□ -1.3
COPB1P53618 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
COPB1P53618 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 AC005725.1-201ENST00000577346 2607 ntBASIC6.96□□□□□ -1.3
COPB1P53618 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
COPB1P53618 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COPB1P53618 AP002833.3-201ENST00000625075 2265 ntBASIC6.96□□□□□ -1.3
COPB1P53618 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.95□□□□□ -1.3
COPB1P53618 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 RPL31P11-201ENST00000426558 1558 ntBASIC6.95□□□□□ -1.3
COPB1P53618 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.95□□□□□ -1.3
COPB1P53618 OOSP1-201ENST00000398992 1270 ntBASIC6.95□□□□□ -1.3
COPB1P53618 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 RPL23AP18-201ENST00000416139 468 ntBASIC6.95□□□□□ -1.3
COPB1P53618 UBE2V2P1-201ENST00000434717 398 ntBASIC6.95□□□□□ -1.3
COPB1P53618 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 AC083855.1-201ENST00000440041 258 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.95□□□□□ -1.3
COPB1P53618 AL020997.1-201ENST00000446554 349 ntBASIC6.95□□□□□ -1.3
COPB1P53618 MTND2P3-201ENST00000452458 470 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AC022080.2-201ENST00000452932 533 ntBASIC6.95□□□□□ -1.3
COPB1P53618 RN7SKP198-201ENST00000459286 306 ntBASIC6.95□□□□□ -1.3
COPB1P53618 OR9A1P-202ENST00000484361 945 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.95□□□□□ -1.3
COPB1P53618 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.95□□□□□ -1.3
COPB1P53618 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.95□□□□□ -1.3
COPB1P53618 OR4A6P-201ENST00000534364 970 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AC089984.3-201ENST00000552838 363 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC6.95□□□□□ -1.3
COPB1P53618 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.95□□□□□ -1.3
COPB1P53618 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.95□□□□□ -1.3
COPB1P53618 AC073046.2-201ENST00000604756 527 ntBASIC6.95□□□□□ -1.3
COPB1P53618 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AL158211.2-201ENST00000607282 395 ntBASIC6.95□□□□□ -1.3
COPB1P53618 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AC073389.3-201ENST00000609434 935 ntBASIC6.95□□□□□ -1.3
COPB1P53618 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 AC243960.7-201ENST00000623532 707 ntBASIC6.95□□□□□ -1.3
COPB1P53618 AP001002.2-201ENST00000625137 386 ntBASIC6.95□□□□□ -1.3
COPB1P53618 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 LINC02495-203ENST00000636704 242 ntBASIC6.95□□□□□ -1.3
COPB1P53618 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 AC079753.1-201ENST00000623243 3868 ntBASIC6.95□□□□□ -1.3
COPB1P53618 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
COPB1P53618 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.95□□□□□ -1.3
COPB1P53618 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
COPB1P53618 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COPB1P53618 BRAFP1-201ENST00000445336 2703 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC009831.5-201ENST00000624000 3189 ntBASIC6.94□□□□□ -1.3
COPB1P53618 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.94□□□□□ -1.3
COPB1P53618 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COPB1P53618 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 OR5T3-201ENST00000303059 1023 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC083799.1-201ENST00000366451 910 ntBASIC6.94□□□□□ -1.3
COPB1P53618 MIR433-201ENST00000384837 93 ntBASIC6.94□□□□□ -1.3
COPB1P53618 SNORA11.5-201ENST00000408163 128 ntBASIC6.94□□□□□ -1.3
COPB1P53618 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.94□□□□□ -1.3
COPB1P53618 RN7SKP221-201ENST00000410420 301 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 VN1R3-201ENST00000418822 919 ntBASIC6.94□□□□□ -1.3
COPB1P53618 CDC42P6-201ENST00000421246 576 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AL139184.1-202ENST00000422303 222 ntBASIC6.94□□□□□ -1.3
COPB1P53618 PTPN2P1-201ENST00000423212 1072 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC083862.1-201ENST00000427378 1242 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AC092106.2-201ENST00000436597 487 ntBASIC6.94□□□□□ -1.3
COPB1P53618 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.94□□□□□ -1.3
COPB1P53618 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.94□□□□□ -1.3
COPB1P53618 BMS1P11-201ENST00000442351 885 ntBASIC6.94□□□□□ -1.3
COPB1P53618 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.94□□□□□ -1.3
COPB1P53618 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
COPB1P53618 AKR1D1P1-201ENST00000457236 936 ntBASIC6.94□□□□□ -1.3
COPB1P53618 BMS1P9-201ENST00000457640 885 ntBASIC6.94□□□□□ -1.3
COPB1P53618 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.94□□□□□ -1.3
COPB1P53618 AC008868.1-201ENST00000509786 737 ntBASIC6.94□□□□□ -1.3
COPB1P53618 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms