Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 MIR585-201ENST00000384887 94 ntBASIC10.79□□□□□ -0.68
SMARCA4P51532 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC10.79□□□□□ -0.68
SMARCA4P51532 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC10.79□□□□□ -0.68
SMARCA4P51532 AL022331.1-201ENST00000429025 477 ntBASIC10.79□□□□□ -0.68
SMARCA4P51532 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC10.79□□□□□ -0.68
SMARCA4P51532 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC10.79□□□□□ -0.68
SMARCA4P51532 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC10.79□□□□□ -0.68
SMARCA4P51532 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SMARCA4P51532 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SMARCA4P51532 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
SMARCA4P51532 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA4P51532 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA4P51532 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SMARCA4P51532 AC006455.6-201ENST00000426192 893 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 OR13C1P-201ENST00000457612 963 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 AC022215.1-201ENST00000481770 362 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 AC004815.1-201ENST00000484185 331 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC10.78□□□□□ -0.68
SMARCA4P51532 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA4P51532 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC10.78□□□□□ -0.68
SMARCA4P51532 AC097467.4-201ENST00000605504 141 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
SMARCA4P51532 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
SMARCA4P51532 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA4P51532 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
SMARCA4P51532 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
SMARCA4P51532 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10.78□□□□□ -0.68
SMARCA4P51532 OFD1P10Y-201ENST00000434110 1433 ntBASIC10.78□□□□□ -0.68
SMARCA4P51532 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA4P51532 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA4P51532 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA4P51532 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
SMARCA4P51532 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC10.77□□□□□ -0.68
SMARCA4P51532 BPHL-201ENST00000380368 797 ntTSL 5 BASIC10.77□□□□□ -0.68
SMARCA4P51532 SNRPEP6-201ENST00000407465 277 ntBASIC10.77□□□□□ -0.68
SMARCA4P51532 RN7SKP29-201ENST00000410957 272 ntBASIC10.77□□□□□ -0.68
SMARCA4P51532 MRPL53P1-201ENST00000414323 319 ntBASIC10.77□□□□□ -0.68
SMARCA4P51532 MAPK10-344ENST00000641718 3746 ntBASIC10.77□□□□□ -0.69
SMARCA4P51532 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SMARCA4P51532 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SMARCA4P51532 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA4P51532 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA4P51532 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC10.77□□□□□ -0.69
SMARCA4P51532 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA4P51532 AC092821.3-202ENST00000641304 2767 ntBASIC10.77□□□□□ -0.69
SMARCA4P51532 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SMARCA4P51532 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SMARCA4P51532 OR10R3P-201ENST00000361688 942 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 OR2W4P-201ENST00000406496 926 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 RPL35AP24-201ENST00000413846 330 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC10.76□□□□□ -0.69
SMARCA4P51532 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC10.76□□□□□ -0.69
SMARCA4P51532 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC10.76□□□□□ -0.69
SMARCA4P51532 RNA5SP92-201ENST00000516437 110 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC10.76□□□□□ -0.69
SMARCA4P51532 MRPS16P1-201ENST00000523462 412 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 OR7E158P-201ENST00000524483 910 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 AC073916.1-201ENST00000545095 130 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC10.76□□□□□ -0.69
SMARCA4P51532 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC10.76□□□□□ -0.69
SMARCA4P51532 AC116651.1-201ENST00000609724 556 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 AC037198.3-201ENST00000616754 526 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 OR11H2-202ENST00000641517 1085 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SMARCA4P51532 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 BDNF-201ENST00000314915 4340 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 AL359976.1-201ENST00000418655 3528 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC10.76□□□□□ -0.69
SMARCA4P51532 MIR1286-201ENST00000408112 78 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 RN7SKP273-201ENST00000411392 314 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC10.76□□□□□ -0.69
SMARCA4P51532 TNPO1P1-201ENST00000423641 1138 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC10.76□□□□□ -0.69
SMARCA4P51532 IGKV1OR10-1-201ENST00000442306 329 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 OR7A15P-201ENST00000449848 1009 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 FRG2FP-204ENST00000453982 852 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 IGKV1OR22-5-201ENST00000458718 354 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 RPL35AP19-201ENST00000469425 329 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC10.76□□□□□ -0.69
SMARCA4P51532 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC10.76□□□□□ -0.69
SMARCA4P51532 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 AC021766.1-201ENST00000624404 741 ntBASIC10.76□□□□□ -0.69
SMARCA4P51532 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SMARCA4P51532 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SMARCA4P51532 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SMARCA4P51532 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC10.76□□□□□ -0.69
SMARCA4P51532 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms