Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 MTND4P11-201ENST00000417020 1058 ntBASIC7.72□□□□□ -1.17
MRE11P49959 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MRE11P49959 AP003385.1-201ENST00000426387 893 ntBASIC7.72□□□□□ -1.17
MRE11P49959 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MRE11P49959 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 LSM3P3-201ENST00000436601 306 ntBASIC7.72□□□□□ -1.17
MRE11P49959 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 AC108868.2-201ENST00000451464 511 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 RPS16P9-201ENST00000477220 427 ntBASIC7.72□□□□□ -1.17
MRE11P49959 RPL23AP8-201ENST00000479812 475 ntBASIC7.72□□□□□ -1.17
MRE11P49959 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.72□□□□□ -1.17
MRE11P49959 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC7.72□□□□□ -1.17
MRE11P49959 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC7.72□□□□□ -1.17
MRE11P49959 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 AC087257.2-201ENST00000538759 928 ntBASIC7.72□□□□□ -1.17
MRE11P49959 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC7.72□□□□□ -1.17
MRE11P49959 AL136520.1-202ENST00000555494 763 ntBASIC7.72□□□□□ -1.17
MRE11P49959 AC096708.2-201ENST00000577676 512 ntBASIC7.72□□□□□ -1.17
MRE11P49959 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 AC010615.3-201ENST00000597319 394 ntBASIC7.72□□□□□ -1.17
MRE11P49959 BNIP3P27-201ENST00000599991 412 ntBASIC7.72□□□□□ -1.17
MRE11P49959 AC108451.2-201ENST00000603875 538 ntBASIC7.72□□□□□ -1.17
MRE11P49959 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MRE11P49959 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.72□□□□□ -1.17
MRE11P49959 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.72□□□□□ -1.17
MRE11P49959 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
MRE11P49959 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 AC004023.1-201ENST00000561473 1744 ntBASIC7.72□□□□□ -1.17
MRE11P49959 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
MRE11P49959 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
MRE11P49959 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.71□□□□□ -1.17
MRE11P49959 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.71□□□□□ -1.17
MRE11P49959 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.71□□□□□ -1.17
MRE11P49959 AC092070.2-203ENST00000598377 3644 ntBASIC7.71□□□□□ -1.17
MRE11P49959 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.71□□□□□ -1.17
MRE11P49959 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.71□□□□□ -1.17
MRE11P49959 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
MRE11P49959 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.17
MRE11P49959 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.71□□□□□ -1.17
MRE11P49959 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 RNA5SP232-201ENST00000364144 119 ntBASIC7.71□□□□□ -1.18
MRE11P49959 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 PTMAP8-201ENST00000397729 342 ntBASIC7.71□□□□□ -1.18
MRE11P49959 OR7E156P-201ENST00000400303 464 ntBASIC7.71□□□□□ -1.18
MRE11P49959 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
MRE11P49959 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.71□□□□□ -1.18
MRE11P49959 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC7.71□□□□□ -1.18
MRE11P49959 AC245452.2-201ENST00000435222 392 ntBASIC7.71□□□□□ -1.18
MRE11P49959 MTND4P15-201ENST00000437913 1033 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 EIF4A2P2-201ENST00000455776 1070 ntBASIC7.71□□□□□ -1.18
MRE11P49959 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.71□□□□□ -1.18
MRE11P49959 OR7E22P-201ENST00000478335 1035 ntBASIC7.71□□□□□ -1.18
MRE11P49959 RN7SL382P-201ENST00000482631 282 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC114324.2-202ENST00000503812 134 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC027308.1-201ENST00000517993 110 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC011853.1-201ENST00000518911 454 ntBASIC7.71□□□□□ -1.18
MRE11P49959 LECT2-205ENST00000522943 574 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC7.71□□□□□ -1.18
MRE11P49959 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.71□□□□□ -1.18
MRE11P49959 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 AC009268.1-201ENST00000561352 1203 ntBASIC7.71□□□□□ -1.18
MRE11P49959 MIR3154-201ENST00000577829 84 ntBASIC7.71□□□□□ -1.18
MRE11P49959 DYNLL1P1-201ENST00000595442 269 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 AC018754.1-201ENST00000607486 925 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.71□□□□□ -1.18
MRE11P49959 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC006249.1-201ENST00000621223 471 ntBASIC7.71□□□□□ -1.18
MRE11P49959 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.71□□□□□ -1.18
MRE11P49959 JAML-213ENST00000640745 951 ntTSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
MRE11P49959 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
MRE11P49959 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
MRE11P49959 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
MRE11P49959 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms