Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.55□□□□□ -1.52
CX3CR1P49238 AP002512.4-202ENST00000641599 4530 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 FANCD2P2-201ENST00000437591 1400 ntBASIC5.55□□□□□ -1.52
CX3CR1P49238 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CX3CR1P49238 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CR1P49238 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CR1P49238 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CR1P49238 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CR1P49238 AL731532.1-201ENST00000623972 4236 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CX3CR1P49238 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CX3CR1P49238 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CR1P49238 RNU11-6P-201ENST00000391127 133 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 NPM1P38-201ENST00000403835 865 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 RPS26P38-201ENST00000414476 348 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 HMGN1P32-201ENST00000441744 256 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CR1P49238 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 RN7SL221P-201ENST00000466190 281 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 RN7SL413P-201ENST00000482700 297 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 OR9A1P-202ENST00000484361 945 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 RN7SL267P-201ENST00000485107 261 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CR1P49238 OR9G2P-201ENST00000533326 880 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 TPRX1P1-201ENST00000557620 319 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 NIFKP4-201ENST00000567275 1192 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 OOSP1P2-201ENST00000579644 351 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 AL591222.2-201ENST00000604443 754 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 AC073046.2-201ENST00000604756 527 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CX3CR1P49238 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CX3CR1P49238 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.54□□□□□ -1.52
CX3CR1P49238 GUCY1B2-204ENST00000531898 1979 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 AL359976.1-201ENST00000418655 3528 ntBASIC5.54□□□□□ -1.52
CX3CR1P49238 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.54□□□□□ -1.52
CX3CR1P49238 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL353763.1-201ENST00000624467 1628 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 MIR433-201ENST00000384837 93 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 TRAV35-201ENST00000390462 330 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 MIR1266-201ENST00000408125 84 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL645939.3-201ENST00000435408 225 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 NPM1P23-201ENST00000440193 849 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AC234771.4-201ENST00000441416 730 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 RN7SL714P-201ENST00000487050 298 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AC093325.1-201ENST00000508378 326 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.53□□□□□ -1.52
CX3CR1P49238 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL133399.1-201ENST00000527476 298 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AC036176.3-201ENST00000602456 418 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AL021368.3-201ENST00000607119 578 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 MIR6070-201ENST00000613967 103 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 MIR7159-201ENST00000620587 66 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CR1P49238 CLUHP10-201ENST00000631979 980 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CR1P49238 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CR1P49238 AC093297.3-201ENST00000607056 2517 ntBASIC5.53□□□□□ -1.52
CX3CR1P49238 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CR1P49238 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CR1P49238 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CR1P49238 MSL3P1-202ENST00000440028 1468 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 145.2 ms