Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX2P48431 MTND2P21-201ENST00000436242 1042 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 AL354714.5-201ENST00000450131 590 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 RN7SL145P-201ENST00000469955 296 ntBASIC5.78□□□□□ -1.48
SOX2P48431 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 AC016687.1-201ENST00000482574 353 ntBASIC5.78□□□□□ -1.48
SOX2P48431 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SOX2P48431 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX2P48431 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 AC022826.1-201ENST00000519383 805 ntBASIC5.78□□□□□ -1.48
SOX2P48431 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.78□□□□□ -1.48
SOX2P48431 NDUFA3P2-201ENST00000531434 232 ntBASIC5.78□□□□□ -1.48
SOX2P48431 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 OR8X1P-201ENST00000534542 869 ntBASIC5.78□□□□□ -1.48
SOX2P48431 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.78□□□□□ -1.48
SOX2P48431 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 PPIAP6-201ENST00000557078 499 ntBASIC5.78□□□□□ -1.48
SOX2P48431 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 AC106785.4-201ENST00000569492 412 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 RN7SL270P-201ENST00000579643 281 ntBASIC5.78□□□□□ -1.48
SOX2P48431 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 PRR13P3-201ENST00000603578 376 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AC104117.5-201ENST00000606195 547 ntBASIC5.78□□□□□ -1.48
SOX2P48431 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 AC010608.3-201ENST00000625048 527 ntBASIC5.78□□□□□ -1.48
SOX2P48431 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC5.78□□□□□ -1.48
SOX2P48431 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX2P48431 AC062022.1-201ENST00000451026 1684 ntBASIC5.78□□□□□ -1.48
SOX2P48431 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 AC119674.1-213ENST00000641177 1386 ntBASIC5.78□□□□□ -1.48
SOX2P48431 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX2P48431 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SOX2P48431 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SOX2P48431 ZNF806-201ENST00000438300 1774 ntBASIC5.78□□□□□ -1.48
SOX2P48431 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
SOX2P48431 AL627171.1-201ENST00000618845 1308 ntBASIC5.77□□□□□ -1.49
SOX2P48431 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SOX2P48431 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 MIR365B-201ENST00000362317 111 ntBASIC5.77□□□□□ -1.49
SOX2P48431 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 CXADRP1-201ENST00000398098 1095 ntBASIC5.77□□□□□ -1.49
SOX2P48431 ATP5F1P6-201ENST00000402768 767 ntBASIC5.77□□□□□ -1.49
SOX2P48431 RPSAP44-201ENST00000406712 884 ntBASIC5.77□□□□□ -1.49
SOX2P48431 RN7SKP236-201ENST00000410635 284 ntBASIC5.77□□□□□ -1.49
SOX2P48431 RN7SKP296-201ENST00000411185 341 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC098592.2-201ENST00000413158 265 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 MTATP6P17-201ENST00000431030 672 ntBASIC5.77□□□□□ -1.49
SOX2P48431 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 AC009518.3-201ENST00000438972 253 ntBASIC5.77□□□□□ -1.49
SOX2P48431 XKRY2-201ENST00000442362 1093 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 MGAT2P1-201ENST00000449718 797 ntBASIC5.77□□□□□ -1.49
SOX2P48431 CCNJP2-201ENST00000457810 1163 ntBASIC5.77□□□□□ -1.49
SOX2P48431 RN7SL654P-201ENST00000479178 292 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC022415.1-202ENST00000486612 523 ntBASIC5.77□□□□□ -1.49
SOX2P48431 OR9N1P-202ENST00000494289 481 ntBASIC5.77□□□□□ -1.49
SOX2P48431 GTF2IP9-201ENST00000502460 301 ntBASIC5.77□□□□□ -1.49
SOX2P48431 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.77□□□□□ -1.49
SOX2P48431 AP005639.1-201ENST00000526939 192 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC023078.5-201ENST00000528646 707 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.77□□□□□ -1.49
SOX2P48431 AL121594.4-201ENST00000556211 1196 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 AC018558.5-201ENST00000565840 952 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC024614.1-201ENST00000577546 307 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.77□□□□□ -1.49
SOX2P48431 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.77□□□□□ -1.49
SOX2P48431 AC107993.1-201ENST00000591343 684 ntBASIC5.77□□□□□ -1.49
SOX2P48431 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SOX2P48431 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.77□□□□□ -1.49
SOX2P48431 BUB1P1-201ENST00000603541 607 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AC068313.1-201ENST00000604028 1008 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AL356986.1-201ENST00000604085 341 ntBASIC5.77□□□□□ -1.49
SOX2P48431 AL590032.1-201ENST00000604920 252 ntBASIC5.77□□□□□ -1.49
SOX2P48431 OR51C1P-201ENST00000608504 942 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms