Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC019080.2-201ENST00000453859 394 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 SNORA35.1-201ENST00000458908 128 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 NDUFB4P1-201ENST00000462398 381 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 PPP1R2P6-201ENST00000478565 588 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 ANK3-213ENST00000486349 493 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC022415.1-202ENST00000486612 523 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NKX2-1P43699 MRPL49P1-201ENST00000505951 535 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.27□□□□□ -1.57
NKX2-1P43699 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC091849.1-201ENST00000509920 121 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AP002981.1-201ENST00000517692 975 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-1P43699 OR4A40P-201ENST00000533878 948 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.27□□□□□ -1.57
NKX2-1P43699 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.27□□□□□ -1.57
NKX2-1P43699 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AL132640.2-202ENST00000559732 614 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 FRG2IP-201ENST00000563581 781 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC024614.1-201ENST00000577546 307 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AL589765.5-201ENST00000596133 515 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 RNU6-84P-201ENST00000607737 102 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 AL352984.2-201ENST00000611153 546 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 AP000720.1-201ENST00000625091 483 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 FKBP1AP4-201ENST00000631775 336 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 OR10AB1P-202ENST00000641219 1686 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 BIN2P1-201ENST00000504996 1530 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.27□□□□□ -1.57
NKX2-1P43699 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NKX2-1P43699 AC020656.2-201ENST00000613291 5309 ntBASIC5.27□□□□□ -1.57
NKX2-1P43699 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.27□□□□□ -1.57
NKX2-1P43699 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 HSPD1P1-201ENST00000503199 1726 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 RNA5SP514-201ENST00000363717 111 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 U3.14-201ENST00000365363 227 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 GNG5P2-201ENST00000372054 207 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-1P43699 IL20-203ENST00000391930 1153 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 AL121835.1-201ENST00000404250 354 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 RNA5SP177-201ENST00000410122 107 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 RN7SKP39-201ENST00000410773 322 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 USP9YP19-201ENST00000412165 485 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 TRIM60P17-201ENST00000415181 719 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 CLCN3P1-201ENST00000423965 1017 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 FDPSP6-201ENST00000425091 512 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AL445528.1-201ENST00000426330 420 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 ANXA2P2-201ENST00000435128 1020 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-1P43699 RPL6P24-201ENST00000445338 864 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 PFN1P11-201ENST00000445829 389 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 RAB28P3-201ENST00000448325 597 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.26□□□□□ -1.57
NKX2-1P43699 RPL7L1P3-201ENST00000455249 689 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 AL022319.1-201ENST00000458183 1167 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NKX2-1P43699 RN7SL221P-201ENST00000466190 281 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 RWDD4P1-201ENST00000488019 565 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.26□□□□□ -1.57
NKX2-1P43699 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.26□□□□□ -1.57
NKX2-1P43699 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
NKX2-1P43699 ENPP7P3-201ENST00000509123 241 ntBASIC5.26□□□□□ -1.57
NKX2-1P43699 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.26□□□□□ -1.57
NKX2-1P43699 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms