Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 OR7E25P-201ENST00000344844 931 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 SNORA40.4-201ENST00000390971 128 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC013470.3-201ENST00000420252 1194 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL157884.1-201ENST00000424561 454 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL645939.3-201ENST00000435408 225 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 GTF2IP14-201ENST00000441415 586 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL355355.1-201ENST00000442900 793 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL031681.1-201ENST00000443304 400 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC092967.1-201ENST00000449016 481 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 SNX18P26-201ENST00000458433 740 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AP002371.1-201ENST00000463604 433 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC025181.1-201ENST00000477507 416 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC114324.2-202ENST00000503812 134 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC026688.1-201ENST00000520639 1168 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 RPL3P13-201ENST00000550415 216 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL049874.4-201ENST00000557593 255 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 MIR4301-201ENST00000577203 66 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC233702.7-202ENST00000582941 211 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 OR7A8P-201ENST00000595427 913 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC007423.1-201ENST00000605009 627 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC092944.2-201ENST00000605443 889 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC092574.1-201ENST00000609771 420 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL589743.6-201ENST00000611025 117 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AL445649.1-201ENST00000615941 691 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC005899.6-201ENST00000620729 297 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC087269.2-201ENST00000641764 975 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 AC110373.1-201ENST00000505994 3505 ntBASIC5.71□□□□□ -1.5
HLA-DOBP13765 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOBP13765 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
HLA-DOBP13765 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AP001157.1-201ENST00000550837 2339 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 WBP11P1-201ENST00000562560 1931 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 DOCK11P1-201ENST00000553480 5932 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 RNA5SP350-201ENST00000363298 111 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 DHFRP5-201ENST00000406944 564 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 RNA5SP115-201ENST00000411160 107 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 OR6R1P-201ENST00000431838 940 ntBASIC5.7□□□□□ -1.5
HLA-DOBP13765 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.7□□□□□ -1.5
HLA-DOBP13765 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms