Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 AC062022.1-201ENST00000451026 1684 ntBASIC6.32□□□□□ -1.4
PCNAP12004 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 AC027279.4-201ENST00000624371 2072 ntBASIC6.32□□□□□ -1.4
PCNAP12004 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PCNAP12004 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.32□□□□□ -1.4
PCNAP12004 AL731556.1-201ENST00000394628 3711 ntBASIC6.32□□□□□ -1.4
PCNAP12004 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.31□□□□□ -1.4
PCNAP12004 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 AC079248.1-201ENST00000427568 1546 ntBASIC6.31□□□□□ -1.4
PCNAP12004 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 DHFRP5-201ENST00000406944 564 ntBASIC6.31□□□□□ -1.4
PCNAP12004 RANP6-201ENST00000413691 644 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 RPL7AP14-201ENST00000424041 802 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 MTCYBP14-201ENST00000457471 715 ntBASIC6.31□□□□□ -1.4
PCNAP12004 RPSAP24-201ENST00000461543 873 ntBASIC6.31□□□□□ -1.4
PCNAP12004 RN7SL350P-201ENST00000492591 299 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AC093325.1-201ENST00000508378 326 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 RN7SKP196-201ENST00000516267 345 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 BCAS2P1-201ENST00000528022 632 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AP003168.1-201ENST00000530091 307 ntBASIC6.31□□□□□ -1.4
PCNAP12004 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.31□□□□□ -1.4
PCNAP12004 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 AC068408.1-201ENST00000577406 1144 ntBASIC6.31□□□□□ -1.4
PCNAP12004 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 AC005520.3-201ENST00000602874 370 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 AC073488.9-201ENST00000631601 754 ntBASIC6.31□□□□□ -1.4
PCNAP12004 AL121936.2-201ENST00000641935 662 ntBASIC6.31□□□□□ -1.4
PCNAP12004 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 AC092070.2-203ENST00000598377 3644 ntBASIC6.31□□□□□ -1.4
PCNAP12004 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.31□□□□□ -1.4
PCNAP12004 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCNAP12004 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PCNAP12004 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.31□□□□□ -1.4
PCNAP12004 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PCNAP12004 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 AC011455.2-201ENST00000599320 3336 ntBASIC6.3□□□□□ -1.4
PCNAP12004 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCNAP12004 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCNAP12004 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCNAP12004 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCNAP12004 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCNAP12004 AL023284.3-201ENST00000407767 334 ntBASIC6.3□□□□□ -1.4
PCNAP12004 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.3□□□□□ -1.4
PCNAP12004 E2F6P1-201ENST00000428850 745 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 E2F6P3-201ENST00000441743 743 ntBASIC6.3□□□□□ -1.4
PCNAP12004 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.3□□□□□ -1.4
PCNAP12004 RAD1P2-201ENST00000446414 663 ntBASIC6.3□□□□□ -1.4
PCNAP12004 UBBP5-201ENST00000446970 266 ntBASIC6.3□□□□□ -1.4
PCNAP12004 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.3□□□□□ -1.4
PCNAP12004 AC089999.1-201ENST00000460336 374 ntBASIC6.3□□□□□ -1.4
PCNAP12004 RPL23AP64-201ENST00000469465 435 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms