Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 MGAT2P1-201ENST00000449718 797 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC094085.1-201ENST00000468914 584 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 MTND3P6-201ENST00000485242 339 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 RBBP4P1-201ENST00000502424 1276 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 OR7E99P-201ENST00000505750 922 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC010343.2-201ENST00000510162 224 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 MIR7159-201ENST00000620587 66 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AP001962.1-201ENST00000624114 559 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC093225.1-201ENST00000506867 1408 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 LPAL2-203ENST00000454031 2498 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 MIR640-201ENST00000385086 96 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 VN1R38P-201ENST00000450265 887 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC090568.1-201ENST00000509499 856 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 RN7SKP35-201ENST00000517210 151 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 MTND1P36-201ENST00000522384 936 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC025423.2-201ENST00000537570 439 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC009712.1-201ENST00000564938 316 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC007346.1-201ENST00000569208 867 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AP001823.1-201ENST00000604056 1003 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC013731.1-201ENST00000604340 883 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC015982.1-201ENST00000608113 465 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC092266.1-201ENST00000610958 165 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC016911.1-201ENST00000613297 452 ntBASIC7.49□□□□□ -1.21
HLA-DOAP06340 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
HLA-DOAP06340 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.49□□□□□ -1.21
HLA-DOAP06340 BRD7P1-201ENST00000557705 1915 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 LYARP1-201ENST00000436977 1501 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 FIG4-202ENST00000368941 791 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 RN7SKP121-201ENST00000410842 305 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.48□□□□□ -1.21
HLA-DOAP06340 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
HLA-DOAP06340 HIGD1AP16-201ENST00000450986 258 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC016724.1-201ENST00000453215 421 ntBASIC7.48□□□□□ -1.21
HLA-DOAP06340 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms