Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPL23AP85-201ENST00000421838 433 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 CYP4F34P-201ENST00000425951 481 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 FECHP1-201ENST00000431896 1214 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPSAP40-201ENST00000442343 891 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 ST13P21-201ENST00000453250 1098 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL133480.2-201ENST00000456723 487 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPLP0P1-201ENST00000457002 361 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPS26P6-201ENST00000475156 348 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPL5P15-201ENST00000475870 897 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RPL7AP23-201ENST00000482625 776 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC105420.1-201ENST00000504389 582 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC026782.2-201ENST00000510845 636 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RNA5SP518-201ENST00000515957 119 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 PVT1-214ENST00000522875 922 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 OR4C1P-201ENST00000530880 937 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 FRG2IP-201ENST00000563581 781 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC027216.1-201ENST00000577726 685 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC060780.2-201ENST00000589047 198 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 COX6CP16-201ENST00000603667 216 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL161420.1-201ENST00000619393 264 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 GVINP1-202ENST00000531871 7271 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AL158152.1-201ENST00000602652 1435 ntBASIC4.7□□□□□ -1.66
HLA-DQA1P01909 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DQA1P01909 AP005435.3-201ENST00000531260 3198 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC090774.4-201ENST00000578888 1372 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 RN7SKP128-201ENST00000364270 303 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 RNU12-2P-201ENST00000364789 156 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 MIR433-201ENST00000384837 93 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 RNA5SP53-201ENST00000391299 120 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 NPM1P18-201ENST00000434232 732 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC099670.2-201ENST00000435130 321 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC112187.1-201ENST00000455837 479 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC090958.1-201ENST00000511122 351 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 NDUFA3P2-201ENST00000531434 232 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AL161931.1-201ENST00000612768 246 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC017037.4-201ENST00000624526 826 ntBASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
HLA-DQA1P01909 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms