Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
SSX4O60224 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX4O60224 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 AL589994.1-201ENST00000404962 340 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX4O60224 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AC002069.1-201ENST00000429649 1159 ntBASIC5.89□□□□□ -1.47
SSX4O60224 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AL354714.5-201ENST00000450131 590 ntBASIC5.89□□□□□ -1.47
SSX4O60224 SEPT7P6-201ENST00000469999 1143 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC098818.1-201ENST00000478593 252 ntBASIC5.89□□□□□ -1.47
SSX4O60224 DEFB109A-201ENST00000482450 265 ntBASIC5.89□□□□□ -1.47
SSX4O60224 RPL29P23-201ENST00000486188 442 ntBASIC5.89□□□□□ -1.47
SSX4O60224 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 MTCYBP44-201ENST00000514835 823 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AC116917.1-201ENST00000520558 305 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX4O60224 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 IGLVV-66-201ENST00000523818 341 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AP003033.2-201ENST00000528901 805 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC024405.1-201ENST00000532521 1042 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.89□□□□□ -1.47
SSX4O60224 AC011270.1-201ENST00000558606 583 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX4O60224 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.89□□□□□ -1.47
SSX4O60224 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AC026951.2-201ENST00000613847 241 ntBASIC5.89□□□□□ -1.47
SSX4O60224 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.89□□□□□ -1.47
SSX4O60224 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AC092724.1-201ENST00000624623 3397 ntBASIC5.89□□□□□ -1.47
SSX4O60224 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SSX4O60224 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.89□□□□□ -1.47
SSX4O60224 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 AC027279.1-201ENST00000568885 4284 ntBASIC5.89□□□□□ -1.47
SSX4O60224 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.89□□□□□ -1.47
SSX4O60224 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SSX4O60224 AC092701.1-201ENST00000623627 1551 ntBASIC5.89□□□□□ -1.47
SSX4O60224 AC140134.1-201ENST00000511830 3544 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AC096992.2-201ENST00000609553 1684 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SSX4O60224 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSX4O60224 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX4O60224 AL360271.1-201ENST00000395679 510 ntBASIC5.88□□□□□ -1.47
SSX4O60224 SPATA20P1-201ENST00000423089 438 ntBASIC5.88□□□□□ -1.47
SSX4O60224 GAPDHP19-201ENST00000431768 1005 ntBASIC5.88□□□□□ -1.47
SSX4O60224 ARL4AP4-201ENST00000434170 518 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX4O60224 XKRYP6-201ENST00000440468 1116 ntBASIC5.88□□□□□ -1.47
SSX4O60224 XKRYP3-201ENST00000442113 1116 ntBASIC5.88□□□□□ -1.47
SSX4O60224 RAD1P2-201ENST00000446414 663 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AC236972.4-201ENST00000458091 963 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AC092824.1-201ENST00000483524 576 ntBASIC5.88□□□□□ -1.47
SSX4O60224 NPM1P27-201ENST00000502784 830 ntBASIC5.88□□□□□ -1.47
SSX4O60224 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.88□□□□□ -1.47
SSX4O60224 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX4O60224 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms