Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.28□□□□□ -1.56
SDCBPO00560 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.28□□□□□ -1.56
SDCBPO00560 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SDCBPO00560 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 AC123769.1-201ENST00000530992 3192 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 AC084782.1-201ENST00000564401 2465 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
SDCBPO00560 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SDCBPO00560 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 RN7SKP221-201ENST00000410420 301 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.28□□□□□ -1.56
SDCBPO00560 AL139184.1-202ENST00000422303 222 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 AC016027.5-201ENST00000427227 210 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 AL645939.3-201ENST00000435408 225 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 COL11A2P1-205ENST00000441798 676 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AL020997.1-201ENST00000446554 349 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 RPL31P11-202ENST00000454082 372 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 RN7SL413P-201ENST00000482700 297 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 OR9G2P-201ENST00000533326 880 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.28□□□□□ -1.56
SDCBPO00560 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 MIR4420-201ENST00000583944 77 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC027334.1-201ENST00000603257 310 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 MIR6883-201ENST00000614952 78 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 MIR6849-201ENST00000618543 69 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC069234.4-201ENST00000621276 412 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC091059.2-201ENST00000623355 614 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AC003992.1-201ENST00000635364 557 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 LINC02495-203ENST00000636704 242 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.28□□□□□ -1.56
SDCBPO00560 FANCD2P2-201ENST00000437591 1400 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.28□□□□□ -1.56
SDCBPO00560 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.28□□□□□ -1.56
SDCBPO00560 AC093297.3-201ENST00000607056 2517 ntBASIC5.28□□□□□ -1.56
SDCBPO00560 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SDCBPO00560 CCNT2P1-201ENST00000423082 1315 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.27□□□□□ -1.57
SDCBPO00560 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.27□□□□□ -1.57
SDCBPO00560 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.27□□□□□ -1.57
SDCBPO00560 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 SNORD16-201ENST00000362803 99 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 RNU1-84P-201ENST00000365447 164 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 RN7SKP129-201ENST00000410288 299 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 RN7SKP281-201ENST00000410472 352 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.27□□□□□ -1.57
SDCBPO00560 AC092651.1-201ENST00000426110 312 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 RPL31P11-201ENST00000426558 1558 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.27□□□□□ -1.57
SDCBPO00560 HMGN1P32-201ENST00000441744 256 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 SUMO2P10-201ENST00000452006 288 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.27□□□□□ -1.57
SDCBPO00560 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 snoU13.29-201ENST00000459370 104 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 RN7SL790P-201ENST00000474043 298 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.27□□□□□ -1.57
SDCBPO00560 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SDCBPO00560 RN7SKP64-201ENST00000517206 328 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AC131935.1-201ENST00000524621 333 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 HNRNPCP1-201ENST00000556181 766 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.27□□□□□ -1.57
SDCBPO00560 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.27□□□□□ -1.57
SDCBPO00560 AC027796.1-201ENST00000575593 512 ntBASIC5.27□□□□□ -1.57
SDCBPO00560 AC133552.4-201ENST00000576103 676 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 350.6 ms