Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 OR7A2P-201ENST00000304105 930 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SKP257-201ENST00000364525 309 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC092634.1-201ENST00000366505 199 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC019178.1-201ENST00000392337 440 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC026310.1-201ENST00000396004 378 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL050305.1-201ENST00000399993 1230 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 RN7SKP205-201ENST00000410999 307 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 MRPS21P5-201ENST00000417885 231 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 CYP4F30P-202ENST00000420048 405 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC006509.1-201ENST00000420788 634 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 CCNJP1-201ENST00000450600 1149 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AKR1D1P1-201ENST00000457236 936 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 IGHV1-14-201ENST00000523391 241 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC026956.1-201ENST00000558741 396 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 OR4C49P-201ENST00000563891 900 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC068408.1-201ENST00000577406 1144 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC007671.1-201ENST00000616957 830 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 U1.41-201ENST00000617626 165 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL132640.3-201ENST00000630473 177 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AC011369.2-201ENST00000624423 1567 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 BIN2P1-201ENST00000504996 1530 ntBASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RHBDD3Q9Y3P4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 OR11H13P-201ENST00000359695 979 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 RNA5SP308-201ENST00000362532 115 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 RNU1-5P-201ENST00000362684 144 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 RNA5SP350-201ENST00000363298 111 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 MORN2-202ENST00000409077 465 ntTSL 5 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AP003385.1-201ENST00000426387 893 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 BMP6P1-201ENST00000431230 679 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 SUMO2P4-201ENST00000504193 276 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC131392.1-201ENST00000506490 633 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 RNA5SP96-201ENST00000516041 107 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 AC092718.4-201ENST00000566639 716 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 MIR3159-201ENST00000584572 74 ntBASIC5.57□□□□□ -1.52
RHBDD3Q9Y3P4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms