Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 RN7SKP81-201ENST00000365603 331 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 MIR128-2-201ENST00000384893 84 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 RNU11-6P-201ENST00000391127 133 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AL096800.1-201ENST00000405326 893 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 MGAT2P2-201ENST00000427194 797 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 NIP7P1-201ENST00000433227 512 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 RPL12P18-201ENST00000437175 325 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC092967.1-201ENST00000449016 481 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 VPS25P1-201ENST00000455691 508 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC137549.1-201ENST00000514243 533 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 RNU6-1334P-201ENST00000516032 105 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC084033.2-201ENST00000551532 967 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AL121579.2-201ENST00000555466 590 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC009120.3-201ENST00000563335 499 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC090286.3-201ENST00000573133 187 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC006363.1-201ENST00000603806 463 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 DIMT1P1-201ENST00000603970 763 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC139792.1-201ENST00000607051 647 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC093635.1-201ENST00000609028 555 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 FRG2MP-201ENST00000613317 856 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC006328.2-201ENST00000623198 397 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 AC012005.2-201ENST00000624333 397 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 OR7E91P-202ENST00000642062 1198 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 TRIM53CP-201ENST00000531490 1354 ntBASIC5.29□□□□□ -1.56
KCNIP3Q9Y2W7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SNORA30B-201ENST00000365319 129 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL050305.1-201ENST00000399993 1230 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 VDAC2P3-201ENST00000430995 828 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 RPL12P16-201ENST00000431098 498 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 KRT18P53-201ENST00000431919 117 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 PRKAR1AP1-201ENST00000441422 1162 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC099340.1-201ENST00000475247 599 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 CYP4F27P-201ENST00000514557 494 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC008429.4-201ENST00000521201 182 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC024614.1-201ENST00000577546 307 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC090616.1-201ENST00000583895 447 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC104117.5-201ENST00000606195 547 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 AC114876.1-201ENST00000490962 1366 ntBASIC5.28□□□□□ -1.56
KCNIP3Q9Y2W7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms