Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AL590004.4-201ENST00000566733 7060 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.86□□□□□ -1.15
SCN11AQ9UI33 AC127070.3-201ENST00000503695 3263 ntBASIC7.86□□□□□ -1.15
SCN11AQ9UI33 ADH4-209ENST00000508393 2151 ntTSL 2 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 RNA5SP350-201ENST00000363298 111 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AC064862.4-201ENST00000442180 334 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 RN7SL165P-201ENST00000477476 291 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AC073581.1-201ENST00000519036 575 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AL136295.6-201ENST00000610486 658 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AC004477.3-201ENST00000614061 590 ntBASIC7.85□□□□□ -1.15
SCN11AQ9UI33 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SCN11AQ9UI33 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AP000866.6-201ENST00000638898 3579 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LSM5-203ENST00000409782 649 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 RN7SKP166-201ENST00000410812 305 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL122020.1-201ENST00000472287 459 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL021918.2-201ENST00000613415 194 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC02250-201ENST00000422117 2491 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 FBXL21-201ENST00000297158 1305 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 MIR323A-201ENST00000362199 86 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 RNA5SP234-201ENST00000363916 119 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AK4P4-201ENST00000419465 646 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 SEPT14P12-201ENST00000442280 560 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 RN7SL515P-201ENST00000463999 297 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC114728.1-201ENST00000488289 483 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 OR4A40P-201ENST00000533878 948 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC073916.1-201ENST00000545095 130 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC006530.1-201ENST00000555980 571 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AC130448.2-201ENST00000624082 374 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SCN11AQ9UI33 AL359091.1-201ENST00000449048 1734 ntBASIC7.84□□□□□ -1.15
SCN11AQ9UI33 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.84□□□□□ -1.16
SCN11AQ9UI33 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
SCN11AQ9UI33 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.84□□□□□ -1.16
SCN11AQ9UI33 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 PDZK1P1-202ENST00000425209 1350 ntBASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.83□□□□□ -1.16
SCN11AQ9UI33 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms