Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 RNA5SP463-201ENST00000363030 120 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 RNU6-297P-201ENST00000384636 107 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 IL6-206ENST00000407492 926 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AP000357.1-201ENST00000409926 1165 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 USP9YP27-201ENST00000418455 438 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC231533.2-201ENST00000419045 978 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AL592114.2-201ENST00000440142 532 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AL022238.1-201ENST00000442557 355 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 CEACAMP5-201ENST00000448037 961 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 NUTF2P4-201ENST00000458353 381 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC018816.1-206ENST00000474544 455 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC080188.1-201ENST00000491923 567 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 MTCO2P4-201ENST00000517968 247 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 OR7K1P-201ENST00000546439 926 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC004825.1-201ENST00000555068 586 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 MIR3913-1-201ENST00000577744 102 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 MIR5192-201ENST00000579892 92 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC068790.7-201ENST00000602347 528 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 MIR7150-201ENST00000614393 94 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 RN7SL301P-202ENST00000618767 298 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 AC016582.3-206ENST00000636547 207 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 RNF145-211ENST00000521606 2658 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AF228730.7-203ENST00000641436 1804 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 BBS12-201ENST00000314218 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 AP005901.5-201ENST00000545779 1796 ntBASIC8.91□□□□□ -0.98
LRCH3Q96II8 CPM-211ENST00000551568 6655 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 DAZ4-203ENST00000382432 2405 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 DAZ2-205ENST00000382433 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC8.91□□□□□ -0.98
LRCH3Q96II8 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LRCH3Q96II8 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL590763.1-201ENST00000398297 1545 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL354993.1-201ENST00000436286 3280 ntTSL 4 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 PDPN-201ENST00000294489 3104 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC132825.4-201ENST00000582527 3644 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC068733.1-202ENST00000531479 2456 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 RNU6-353P-201ENST00000364266 108 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 ARMC8P1-201ENST00000443069 1289 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 RBMY3AP-201ENST00000449381 1145 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 RPS29P5-201ENST00000452777 171 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC080129.1-201ENST00000457815 406 ntTSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 SNORD42A-201ENST00000459584 64 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 RPS18P13-201ENST00000461260 454 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC115223.1-201ENST00000466377 870 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 OR7E28P-201ENST00000505191 975 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC108078.1-201ENST00000508073 725 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LRCH3Q96II8 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 OR7E83P-201ENST00000511021 970 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 IGHVIII-82-201ENST00000522058 250 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 AP001893.2-201ENST00000526949 202 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 OR4A11P-201ENST00000529557 906 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 PHBP2-201ENST00000532859 806 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 NUTF2P2-201ENST00000551207 384 ntBASIC8.9□□□□□ -0.98
LRCH3Q96II8 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.9□□□□□ -0.98
LRCH3Q96II8 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms