Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC026956.1-201ENST00000558741 396 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC012414.2-201ENST00000559474 187 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 MRPS21P9-201ENST00000571150 257 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 MIR378H-201ENST00000579966 83 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC008147.4-201ENST00000617570 1204 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 U1.41-201ENST00000617626 165 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC005514.1-201ENST00000623521 208 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AC117503.3-201ENST00000623811 601 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 AL137918.1-201ENST00000624542 1922 ntBASIC6.65□□□□□ -1.34
ATG4AQ8WYN0 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
ATG4AQ8WYN0 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 OR2AH1P-202ENST00000641232 2744 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 RNA5SP140-201ENST00000364524 92 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 LCN1P2-201ENST00000372030 223 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL589655.1-201ENST00000405398 482 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL139039.2-201ENST00000407436 479 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL161742.1-201ENST00000418154 584 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CYP4F30P-202ENST00000420048 405 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL354692.1-201ENST00000423044 315 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL138479.1-201ENST00000426913 484 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 E2F6P1-201ENST00000428850 745 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 NPM1P48-201ENST00000436002 853 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 E2F6P3-201ENST00000441743 743 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC103563.5-201ENST00000455643 364 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 FCGR1CP-201ENST00000579737 1127 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 BNIP3P19-201ENST00000605397 577 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC034229.4-201ENST00000607861 441 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL008723.3-201ENST00000608926 449 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 MAPK10-287ENST00000641217 3037 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 AL592494.2-201ENST00000425455 1548 ntBASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ATG4AQ8WYN0 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms