Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 FABP5P1-201ENST00000423401 411 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 USP9YP24-201ENST00000434374 697 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 VN1R25P-201ENST00000443385 738 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 USP9YP17-201ENST00000444617 696 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 MED28P7-201ENST00000456611 530 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC015864.1-201ENST00000496512 544 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC010374.1-201ENST00000503762 1237 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ASNSP4-201ENST00000511103 447 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SCARNA11.1-201ENST00000516918 132 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL442163.2-201ENST00000553912 710 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL109628.1-201ENST00000556877 366 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 WDR45BP1-201ENST00000583470 1029 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ZNF92P3-201ENST00000596594 954 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC021171.1-201ENST00000603137 706 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC015849.2-201ENST00000605738 409 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC093875.1-201ENST00000623688 504 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AC006927.2-201ENST00000639256 389 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 AL136981.1-203ENST00000451452 3844 ntBASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.88□□□□□ -1.31
TRIM48Q8IWZ4 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL022393.1-201ENST00000625142 1677 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL358913.2-201ENST00000553881 1548 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC017002.4-201ENST00000604721 1525 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NF1P8-201ENST00000415351 1461 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AP001157.1-201ENST00000550837 2339 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RNU5B-4P-201ENST00000363508 111 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RN7SKP107-201ENST00000364157 290 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC234772.1-201ENST00000377927 937 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MIR513B-201ENST00000385136 84 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 CXADRP1-201ENST00000398098 1095 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RANP4-201ENST00000413361 655 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 MYO5BP3-201ENST00000431872 1279 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 CHCHD4P5-201ENST00000436684 427 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC112492.1-201ENST00000449607 712 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC079193.1-201ENST00000460497 588 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RN7SL492P-201ENST00000460700 295 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 CYCSP20-201ENST00000473154 315 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RPS17P11-201ENST00000474297 293 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC004263.1-201ENST00000479327 332 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 RN7SL705P-201ENST00000481678 294 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC146944.3-201ENST00000509969 371 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC010486.3-201ENST00000511602 785 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 OR10J9P-201ENST00000511932 987 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC067904.2-201ENST00000517322 1283 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 OR4A1P-201ENST00000532342 920 ntBASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.87□□□□□ -1.31
TRIM48Q8IWZ4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms