Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
H3F3CQ6NXT2 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL157702.1-201ENST00000398764 426 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 RPL5P7-201ENST00000444235 813 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 RPL12P31-201ENST00000478433 450 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 ZNF519P4-201ENST00000514008 125 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC036111.2-201ENST00000533247 901 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC006512.2-201ENST00000543250 486 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 RN7SL475P-201ENST00000583379 298 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC067852.5-201ENST00000589299 310 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL359704.2-201ENST00000604335 521 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL034374.2-201ENST00000605281 548 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AL445647.2-201ENST00000615170 130 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC105114.1-201ENST00000624795 1862 ntBASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.94□□□□□ -1.46
H3F3CQ6NXT2 AC010624.4-201ENST00000597606 1351 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 OR2M1P-201ENST00000318104 951 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 SNORD16-201ENST00000362803 99 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL023284.3-201ENST00000407767 334 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 RNA5SP431-201ENST00000410312 120 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 RPL23AP18-201ENST00000416139 468 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 MTND2P12-201ENST00000417560 1252 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 RPSAP65-201ENST00000429660 595 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL138899.2-201ENST00000439139 499 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 GTF2IP14-201ENST00000441415 586 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC022415.1-202ENST00000486612 523 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC011853.1-201ENST00000518911 454 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 TOMM20P1-201ENST00000534518 427 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC004232.2-201ENST00000574245 821 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC090616.1-201ENST00000583895 447 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 AC099654.3-201ENST00000447087 1546 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 NEK2P2-201ENST00000438441 1338 ntBASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC5.93□□□□□ -1.46
H3F3CQ6NXT2 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms