Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 RPL12P23-201ENST00000405880 490 ntBASIC4.32□□□□□ -1.72
RPL39P62891 RPL12P10-201ENST00000413498 498 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 AHCYP8-201ENST00000425108 209 ntBASIC4.32□□□□□ -1.72
RPL39P62891 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.32□□□□□ -1.72
RPL39P62891 KRT8P51-201ENST00000438938 274 ntBASIC4.32□□□□□ -1.72
RPL39P62891 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 AL139135.2-201ENST00000445040 433 ntBASIC4.32□□□□□ -1.72
RPL39P62891 RPL6P24-201ENST00000445338 864 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AL121578.2-201ENST00000448797 447 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AL162739.1-201ENST00000450606 307 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 RN7SL352P-201ENST00000466002 277 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC4.32□□□□□ -1.72
RPL39P62891 AC106760.2-201ENST00000504159 619 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 TPM3P3-201ENST00000521343 354 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.32□□□□□ -1.72
RPL39P62891 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 AL049779.3-201ENST00000557141 606 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 RNU4ATAC-201ENST00000580972 127 ntBASIC4.32□□□□□ -1.72
RPL39P62891 RN7SL475P-201ENST00000583379 298 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC005332.4-201ENST00000592752 579 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 AC004805.3-201ENST00000603178 310 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC026333.4-201ENST00000613543 544 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AL137067.2-201ENST00000621202 131 ntBASIC4.32□□□□□ -1.72
RPL39P62891 KDM5DP1-201ENST00000622542 298 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC007347.2-201ENST00000623044 180 ntBASIC4.32□□□□□ -1.72
RPL39P62891 AC005514.1-201ENST00000623521 208 ntBASIC4.32□□□□□ -1.72
RPL39P62891 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC4.32□□□□□ -1.72
RPL39P62891 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.32□□□□□ -1.72
RPL39P62891 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RPL39P62891 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RPL39P62891 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 AC005702.3-201ENST00000585345 1447 ntBASIC4.31□□□□□ -1.72
RPL39P62891 BCORP1-203ENST00000513194 5093 ntBASIC4.31□□□□□ -1.72
RPL39P62891 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 RN7SKP1-201ENST00000365525 307 ntBASIC4.31□□□□□ -1.72
RPL39P62891 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RPL39P62891 AL451061.1-201ENST00000407887 862 ntBASIC4.31□□□□□ -1.72
RPL39P62891 RN7SKP91-201ENST00000410852 288 ntBASIC4.31□□□□□ -1.72
RPL39P62891 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 OR52S1P-201ENST00000427016 937 ntBASIC4.31□□□□□ -1.72
RPL39P62891 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 AC013403.1-201ENST00000436954 263 ntBASIC4.31□□□□□ -1.72
RPL39P62891 RPL21P42-201ENST00000488408 464 ntBASIC4.31□□□□□ -1.72
RPL39P62891 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 RPL10P7-201ENST00000495649 625 ntBASIC4.31□□□□□ -1.72
RPL39P62891 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 TOMM22P4-201ENST00000511318 336 ntBASIC4.31□□□□□ -1.72
RPL39P62891 RN7SKP196-201ENST00000516267 345 ntBASIC4.31□□□□□ -1.72
RPL39P62891 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 AC244502.2-201ENST00000543361 851 ntBASIC4.31□□□□□ -1.72
RPL39P62891 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.31□□□□□ -1.72
RPL39P62891 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 AC133552.4-201ENST00000576103 676 ntBASIC4.31□□□□□ -1.72
RPL39P62891 RN7SL311P-201ENST00000579858 306 ntBASIC4.31□□□□□ -1.72
RPL39P62891 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC4.31□□□□□ -1.72
RPL39P62891 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC4.31□□□□□ -1.72
RPL39P62891 AC025857.2-201ENST00000602711 238 ntBASIC4.31□□□□□ -1.72
RPL39P62891 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 AL136097.3-201ENST00000611097 505 ntBASIC4.31□□□□□ -1.72
RPL39P62891 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.31□□□□□ -1.72
RPL39P62891 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 AP000432.2-201ENST00000624164 2048 ntBASIC4.31□□□□□ -1.72
RPL39P62891 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RPL39P62891 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms