Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RPS3AP61247 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.2□□□□□ -1.42
RPS3AP61247 AC092724.1-201ENST00000624623 3397 ntBASIC6.2□□□□□ -1.42
RPS3AP61247 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.19□□□□□ -1.42
RPS3AP61247 TRIM53CP-201ENST00000531490 1354 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 AC087516.1-201ENST00000561236 2428 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 AL079341.1-201ENST00000404701 1207 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.19□□□□□ -1.42
RPS3AP61247 MTND2P3-201ENST00000452458 470 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 AC022730.1-201ENST00000473114 568 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 RN7SL654P-201ENST00000479178 292 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.19□□□□□ -1.42
RPS3AP61247 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 MTCYBP44-201ENST00000514835 823 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 OR7E10P-201ENST00000526420 991 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 AP002004.1-206ENST00000532441 876 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.19□□□□□ -1.42
RPS3AP61247 AC004908.1-201ENST00000606572 541 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 U91328.4-201ENST00000608919 517 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.19□□□□□ -1.42
RPS3AP61247 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.19□□□□□ -1.42
RPS3AP61247 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RPS3AP61247 AC093671.1-201ENST00000624981 2929 ntBASIC6.19□□□□□ -1.42
RPS3AP61247 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 AC011369.2-201ENST00000624423 1567 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.18□□□□□ -1.42
RPS3AP61247 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.18□□□□□ -1.42
RPS3AP61247 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 AC005725.1-201ENST00000577346 2607 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RPS3AP61247 AC087565.3-202ENST00000642085 1603 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AC092111.2-201ENST00000611627 1414 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 OR51C1P-202ENST00000641159 1444 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RPS3AP61247 OR2M1P-201ENST00000318104 951 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RPS3AP61247 MIR365B-201ENST00000362317 111 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 RNA5SP152-201ENST00000365184 110 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 LDHAP5-201ENST00000394996 622 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 CDY17P-201ENST00000414121 1282 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.18□□□□□ -1.42
RPS3AP61247 AC007568.1-201ENST00000422912 471 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 GAPDHP57-201ENST00000424400 585 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 MRPS21P2-201ENST00000424704 264 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 CDY8P-201ENST00000428380 1279 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.18□□□□□ -1.42
RPS3AP61247 E2F6P1-201ENST00000428850 745 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.18□□□□□ -1.42
RPS3AP61247 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.18□□□□□ -1.42
RPS3AP61247 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RPS3AP61247 CDY20P-201ENST00000447528 1279 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 RN7SL372P-201ENST00000461982 298 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 RPS4XP17-201ENST00000479057 754 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AC005017.1-201ENST00000482002 490 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 OR9N1P-201ENST00000491296 333 ntBASIC6.18□□□□□ -1.42
RPS3AP61247 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.18□□□□□ -1.42
RPS3AP61247 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms