Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC097467.4-201ENST00000605504 141 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 SNORA74.4-201ENST00000607595 199 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.73□□□□□ -1.49
CLDN18P56856 AL109924.4-201ENST00000623089 670 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 AC009120.7-201ENST00000623452 780 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
CLDN18P56856 AL022323.4-201ENST00000623980 13120 ntBASIC5.73□□□□□ -1.49
CLDN18P56856 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CLDN18P56856 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CLDN18P56856 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC5.73□□□□□ -1.49
CLDN18P56856 OR4G1P-202ENST00000641173 1788 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 AC010401.2-201ENST00000575137 4934 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN18P56856 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
CLDN18P56856 CYP2G2P-201ENST00000594920 1485 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AL139805.1-201ENST00000407837 289 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AL035422.1-201ENST00000414193 397 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AKR1B10P1-201ENST00000425765 942 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC112492.2-201ENST00000432774 1030 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC094019.1-201ENST00000434678 472 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC011742.2-201ENST00000443818 352 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 POU5F1P5-201ENST00000445059 658 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 MGAT2P1-201ENST00000449718 797 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 CCNJP2-201ENST00000457810 1163 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC021006.1-201ENST00000489849 553 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 RPL37P23-201ENST00000492641 294 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 NPM1P27-201ENST00000502784 830 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 HMGN1P17-201ENST00000513734 295 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.72□□□□□ -1.49
CLDN18P56856 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC004232.2-201ENST00000574245 821 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 AC005332.4-201ENST00000592752 579 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.72□□□□□ -1.49
CLDN18P56856 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 AL132640.3-201ENST00000630473 177 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 OR7E91P-202ENST00000642062 1198 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.72□□□□□ -1.49
CLDN18P56856 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC5.72□□□□□ -1.49
CLDN18P56856 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CLDN18P56856 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLDN18P56856 MAPK10-261ENST00000641050 3109 ntBASIC5.72□□□□□ -1.49
CLDN18P56856 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.72□□□□□ -1.49
CLDN18P56856 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.71□□□□□ -1.49
CLDN18P56856 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN18P56856 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN18P56856 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CLDN18P56856 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.49
CLDN18P56856 UGT2B27P-201ENST00000505092 1620 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AP002370.1-201ENST00000528055 1602 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 AC007114.2-201ENST00000576014 4281 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 AC108479.1-201ENST00000431142 427 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 SOCS5P1-201ENST00000440415 949 ntBASIC5.71□□□□□ -1.5
CLDN18P56856 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.71□□□□□ -1.5
CLDN18P56856 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.71□□□□□ -1.5
CLDN18P56856 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.71□□□□□ -1.5
CLDN18P56856 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLDN18P56856 PPP1R11P1-201ENST00000486095 376 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms