Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
VCPP55072 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
VCPP55072 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
VCPP55072 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
VCPP55072 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VCPP55072 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.96□□□□□ -1.29
VCPP55072 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VCPP55072 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
VCPP55072 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.96□□□□□ -1.3
VCPP55072 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.96□□□□□ -1.3
VCPP55072 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.96□□□□□ -1.3
VCPP55072 AL663061.1-201ENST00000416625 580 ntBASIC6.96□□□□□ -1.3
VCPP55072 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.96□□□□□ -1.3
VCPP55072 RPSAP65-201ENST00000429660 595 ntBASIC6.96□□□□□ -1.3
VCPP55072 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.96□□□□□ -1.3
VCPP55072 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.96□□□□□ -1.3
VCPP55072 RPL5P7-201ENST00000444235 813 ntBASIC6.96□□□□□ -1.3
VCPP55072 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.96□□□□□ -1.3
VCPP55072 CT45A11P-201ENST00000448043 1134 ntBASIC6.96□□□□□ -1.3
VCPP55072 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 RN7SL254P-201ENST00000460609 284 ntBASIC6.96□□□□□ -1.3
VCPP55072 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.96□□□□□ -1.3
VCPP55072 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.96□□□□□ -1.3
VCPP55072 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.96□□□□□ -1.3
VCPP55072 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.96□□□□□ -1.3
VCPP55072 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.96□□□□□ -1.3
VCPP55072 AC012653.2-201ENST00000621880 420 ntBASIC6.96□□□□□ -1.3
VCPP55072 AL357140.4-201ENST00000636827 412 ntBASIC6.96□□□□□ -1.3
VCPP55072 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.96□□□□□ -1.3
VCPP55072 PARP4P1-201ENST00000435945 2337 ntBASIC6.96□□□□□ -1.3
VCPP55072 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.96□□□□□ -1.3
VCPP55072 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.96□□□□□ -1.3
VCPP55072 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
VCPP55072 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VCPP55072 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.95□□□□□ -1.3
VCPP55072 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 RN7SKP144-201ENST00000411108 279 ntBASIC6.95□□□□□ -1.3
VCPP55072 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.95□□□□□ -1.3
VCPP55072 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.95□□□□□ -1.3
VCPP55072 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.95□□□□□ -1.3
VCPP55072 SNRPBP1-201ENST00000443634 282 ntBASIC6.95□□□□□ -1.3
VCPP55072 HMGB1P7-201ENST00000450921 612 ntBASIC6.95□□□□□ -1.3
VCPP55072 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.95□□□□□ -1.3
VCPP55072 RPL5P12-201ENST00000477071 851 ntBASIC6.95□□□□□ -1.3
VCPP55072 RPL7AP23-201ENST00000482625 776 ntBASIC6.95□□□□□ -1.3
VCPP55072 IGHV3-57-201ENST00000520143 280 ntBASIC6.95□□□□□ -1.3
VCPP55072 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.95□□□□□ -1.3
VCPP55072 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.95□□□□□ -1.3
VCPP55072 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.95□□□□□ -1.3
VCPP55072 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.95□□□□□ -1.3
VCPP55072 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
VCPP55072 MIR4301-201ENST00000577203 66 ntBASIC6.95□□□□□ -1.3
VCPP55072 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 AL589743.6-201ENST00000611025 117 ntBASIC6.95□□□□□ -1.3
VCPP55072 AC005393.1-201ENST00000617916 584 ntBASIC6.95□□□□□ -1.3
VCPP55072 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.95□□□□□ -1.3
VCPP55072 AC010168.2-201ENST00000562691 5428 ntBASIC6.95□□□□□ -1.3
VCPP55072 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
VCPP55072 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.95□□□□□ -1.3
VCPP55072 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.95□□□□□ -1.3
VCPP55072 MTCO1P25-201ENST00000414449 1799 ntBASIC6.95□□□□□ -1.3
VCPP55072 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.94□□□□□ -1.3
VCPP55072 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
VCPP55072 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 ZNF969P-201ENST00000510345 2341 ntBASIC6.94□□□□□ -1.3
VCPP55072 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
VCPP55072 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
VCPP55072 RPL11P4-201ENST00000332269 436 ntBASIC6.94□□□□□ -1.3
VCPP55072 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms