Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC5.54□□□□□ -1.52
HCFC1P51610 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 BMS1P13-201ENST00000417301 885 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.54□□□□□ -1.52
HCFC1P51610 AC016908.1-201ENST00000442571 1219 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 BMS1P10-201ENST00000443754 1120 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 SNORA58-201ENST00000505219 137 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC5.54□□□□□ -1.52
HCFC1P51610 AP000662.1-201ENST00000530952 487 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 AC090022.1-201ENST00000546569 311 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.54□□□□□ -1.52
HCFC1P51610 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 AC092121.1-201ENST00000569452 202 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 MIR3176-201ENST00000582210 90 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 CYP2G2P-201ENST00000594920 1485 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 AC008627.1-201ENST00000517511 1704 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 AC119674.1-204ENST00000641348 1343 ntBASIC5.54□□□□□ -1.52
HCFC1P51610 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HCFC1P51610 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HCFC1P51610 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.54□□□□□ -1.52
HCFC1P51610 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 EEF1B2P8-201ENST00000414101 671 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 RPL6P21-201ENST00000418672 846 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCFC1P51610 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 AL121578.1-201ENST00000428051 892 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 CDK7P1-201ENST00000434574 693 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.53□□□□□ -1.52
HCFC1P51610 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 AC098799.1-201ENST00000504752 800 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 CR383658.1-201ENST00000514609 734 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 RNA5SP434-201ENST00000516647 121 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.53□□□□□ -1.52
HCFC1P51610 AC090616.1-201ENST00000583895 447 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 AC025171.4-201ENST00000607250 1047 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 AC022467.1-201ENST00000614738 749 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 AC016542.2-201ENST00000624201 619 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 AC073488.3-201ENST00000631611 778 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCFC1P51610 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCFC1P51610 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCFC1P51610 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 CYCSP52-201ENST00000422857 310 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.53□□□□□ -1.52
HCFC1P51610 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.53□□□□□ -1.52
HCFC1P51610 RN7SL326P-201ENST00000477493 296 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 MTND6P8-201ENST00000503471 522 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HCFC1P51610 MIR5095-201ENST00000578844 88 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.53□□□□□ -1.52
HCFC1P51610 PLEKHA3P1-201ENST00000598554 894 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 MIR6729-201ENST00000618194 65 ntBASIC5.53□□□□□ -1.52
HCFC1P51610 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.53□□□□□ -1.52
HCFC1P51610 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HCFC1P51610 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HCFC1P51610 AC123769.2-201ENST00000624332 5984 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms