Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SNORA70-201ENST00000384436 135 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 MIR585-201ENST00000384887 94 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 OR6E1P-201ENST00000414424 923 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 RPL36P18-201ENST00000419316 318 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 NMD3P2-201ENST00000421815 761 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 AC005532.2-201ENST00000467154 373 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC7.29□□□□□ -1.24
COL4A5P29400 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 LINC02019-201ENST00000608605 2060 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 AC241584.2-201ENST00000637142 2090 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 HDAC1P2-201ENST00000453661 1398 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 AC007342.5-201ENST00000571340 2142 ntBASIC7.29□□□□□ -1.24
COL4A5P29400 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
COL4A5P29400 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A5P29400 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A5P29400 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.29□□□□□ -1.24
COL4A5P29400 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A5P29400 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
COL4A5P29400 AK4P4-201ENST00000419465 646 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A5P29400 RN7SL610P-201ENST00000463845 291 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 AC004815.1-201ENST00000484185 331 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 RN7SL57P-201ENST00000493687 290 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 OR5M14P-201ENST00000506803 618 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC108043.1-201ENST00000512696 574 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 RNA5SP92-201ENST00000516437 110 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 ASB8-215ENST00000540782 659 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC061975.7-201ENST00000592016 2692 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A5P29400 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.28□□□□□ -1.24
COL4A5P29400 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A5P29400 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 AC016739.1-201ENST00000405359 345 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 SNRPEP6-201ENST00000407465 277 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 MRPL53P1-201ENST00000414323 319 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC009237.1-201ENST00000442127 744 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC073594.1-201ENST00000462065 364 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC114728.1-201ENST00000488289 483 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC093763.2-201ENST00000505334 1223 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.28□□□□□ -1.24
COL4A5P29400 IGLV2-28-201ENST00000520681 304 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 FAM27E4-201ENST00000605259 342 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 MIR6748-201ENST00000610433 71 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AL359513.1-201ENST00000614364 557 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.28□□□□□ -1.24
COL4A5P29400 AC087565.3-203ENST00000641018 837 ntBASIC7.28□□□□□ -1.24
COL4A5P29400 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.28□□□□□ -1.24
COL4A5P29400 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.27□□□□□ -1.24
COL4A5P29400 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
COL4A5P29400 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A5P29400 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A5P29400 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
COL4A5P29400 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.27□□□□□ -1.25
COL4A5P29400 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A5P29400 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
COL4A5P29400 RNA5SP375-201ENST00000362975 119 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 MIR433-201ENST00000384837 93 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.27□□□□□ -1.25
COL4A5P29400 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.27□□□□□ -1.25
COL4A5P29400 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 CYP4F30P-202ENST00000420048 405 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A5P29400 RPS27AP3-201ENST00000453803 454 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 AL157777.1-201ENST00000468100 304 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 AC095057.1-201ENST00000507583 168 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A5P29400 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.27□□□□□ -1.25
COL4A5P29400 SNORA43.3-201ENST00000517240 103 ntBASIC7.27□□□□□ -1.25
COL4A5P29400 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms