Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
SMARCA1P28370 OR7E25P-201ENST00000344844 931 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 RN7SKP250-201ENST00000363924 321 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.44□□□□□ -1.22
SMARCA1P28370 RPL36P18-201ENST00000419316 318 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AL356806.1-201ENST00000422524 916 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 AL157884.1-201ENST00000424561 454 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC7.44□□□□□ -1.22
SMARCA1P28370 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.44□□□□□ -1.22
SMARCA1P28370 YRDCP3-201ENST00000456507 480 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AC068522.1-201ENST00000482895 345 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 GUSBP9-201ENST00000510138 584 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 RNA5SP418-201ENST00000515951 117 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC7.44□□□□□ -1.22
SMARCA1P28370 AC122134.1-202ENST00000569111 1201 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AC012368.3-201ENST00000604190 219 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 AC092944.2-201ENST00000605443 889 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.44□□□□□ -1.22
SMARCA1P28370 MAPK10-365ENST00000641902 3825 ntBASIC7.44□□□□□ -1.22
SMARCA1P28370 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.44□□□□□ -1.22
SMARCA1P28370 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.44□□□□□ -1.22
SMARCA1P28370 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
SMARCA1P28370 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 SELE-203ENST00000367775 3389 ntTSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 FAM32BP-201ENST00000344033 333 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 STAG3L4-201ENST00000352103 530 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 RNA5SP333-201ENST00000363466 118 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 RNA5SP334-201ENST00000364825 118 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 TRGV7-201ENST00000427089 353 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.43□□□□□ -1.22
SMARCA1P28370 RN7SL39P-201ENST00000462264 297 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 RPL12P31-201ENST00000478433 450 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC7.43□□□□□ -1.22
SMARCA1P28370 HMGN1P16-201ENST00000508308 283 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC106800.3-201ENST00000511389 308 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 MTND1P36-201ENST00000522384 936 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AP003033.2-201ENST00000528901 805 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 RN7SL475P-201ENST00000583379 298 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC7.43□□□□□ -1.22
SMARCA1P28370 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.43□□□□□ -1.22
SMARCA1P28370 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 MRPL57P1-201ENST00000621486 265 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 OR8A1-204ENST00000642111 1145 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 MTCO1P22-201ENST00000604619 1360 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.43□□□□□ -1.22
SMARCA1P28370 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMARCA1P28370 AP000866.6-201ENST00000638898 3579 ntBASIC7.43□□□□□ -1.22
SMARCA1P28370 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
SMARCA1P28370 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SMARCA1P28370 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SMARCA1P28370 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMARCA1P28370 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.42□□□□□ -1.22
SMARCA1P28370 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
SMARCA1P28370 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SMARCA1P28370 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.42□□□□□ -1.22
SMARCA1P28370 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
SMARCA1P28370 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.42□□□□□ -1.22
SMARCA1P28370 PSMA6P1-201ENST00000400275 741 ntBASIC7.42□□□□□ -1.22
SMARCA1P28370 DHFRP2-201ENST00000414224 547 ntBASIC7.42□□□□□ -1.22
SMARCA1P28370 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.42□□□□□ -1.22
SMARCA1P28370 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SMARCA1P28370 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.42□□□□□ -1.22
SMARCA1P28370 EMC3-AS1-205ENST00000438698 534 ntBASIC7.42□□□□□ -1.22
SMARCA1P28370 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.42□□□□□ -1.22
SMARCA1P28370 CCNJP2-201ENST00000457810 1163 ntBASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms