Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PNKDP1-201ENST00000435914 430 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AL590004.3-202ENST00000445883 451 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC097463.1-201ENST00000447288 481 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AL358876.1-201ENST00000453364 1075 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 MIR4701-201ENST00000583094 63 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC092474.3-201ENST00000603022 568 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 BNIP3P35-201ENST00000604530 490 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC092681.3-201ENST00000609463 678 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AP005212.4-201ENST00000614206 710 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 AP002371.2-201ENST00000624450 503 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 AC020978.8-201ENST00000571975 3022 ntBASIC7.52□□□□□ -1.21
HLA-DOAP06340 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
HLA-DOAP06340 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.52□□□□□ -1.21
HLA-DOAP06340 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 CDY10P-201ENST00000452415 1567 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC005332.9-201ENST00000620266 2921 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC025809.2-201ENST00000625085 1802 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 MAPK10-383ENST00000642032 3390 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 RNA5SP350-201ENST00000363298 111 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 RN7SKP275-201ENST00000364626 301 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 MTND2P15-201ENST00000418575 892 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 EIF5AP4-201ENST00000441206 465 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 CAB39P1-201ENST00000502277 460 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AL138895.2-201ENST00000603019 178 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC139493.1-201ENST00000604368 397 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC012467.1-201ENST00000607740 256 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
HLA-DOAP06340 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 AC011379.1-201ENST00000508713 3025 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 CTAGE11P-201ENST00000451540 2353 ntBASIC7.51□□□□□ -1.21
HLA-DOAP06340 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.51□□□□□ -1.21
HLA-DOAP06340 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 HSPD1P4-201ENST00000547203 1702 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 FO082842.1-201ENST00000423552 1370 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC004386.1-201ENST00000393214 761 ntBASIC7.5□□□□□ -1.21
HLA-DOAP06340 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
HLA-DOAP06340 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.5□□□□□ -1.21
HLA-DOAP06340 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms