Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 AL138479.1-201ENST00000426913 484 ntBASIC5.3□□□□□ -1.56
CD74P04233 AC073410.1-201ENST00000435125 589 ntBASIC5.3□□□□□ -1.56
CD74P04233 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 UBBP5-201ENST00000446970 266 ntBASIC5.3□□□□□ -1.56
CD74P04233 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.3□□□□□ -1.56
CD74P04233 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 AC010409.2-201ENST00000505780 478 ntBASIC5.3□□□□□ -1.56
CD74P04233 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD74P04233 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 AC010442.1-201ENST00000515583 816 ntBASIC5.3□□□□□ -1.56
CD74P04233 AC136777.2-201ENST00000522979 358 ntBASIC5.3□□□□□ -1.56
CD74P04233 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.3□□□□□ -1.56
CD74P04233 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.3□□□□□ -1.56
CD74P04233 MIR1273F-201ENST00000580581 99 ntBASIC5.3□□□□□ -1.56
CD74P04233 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 MIR4433B-201ENST00000581329 102 ntBASIC5.3□□□□□ -1.56
CD74P04233 WDR45BP1-201ENST00000583470 1029 ntBASIC5.3□□□□□ -1.56
CD74P04233 AC027229.1-201ENST00000583887 253 ntBASIC5.3□□□□□ -1.56
CD74P04233 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.3□□□□□ -1.56
CD74P04233 AC099777.1-201ENST00000603779 1070 ntBASIC5.3□□□□□ -1.56
CD74P04233 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.3□□□□□ -1.56
CD74P04233 RPL12P48-201ENST00000605620 304 ntBASIC5.3□□□□□ -1.56
CD74P04233 FRG2MP-201ENST00000613317 856 ntBASIC5.3□□□□□ -1.56
CD74P04233 MIR665-201ENST00000635949 72 ntBASIC5.3□□□□□ -1.56
CD74P04233 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CD74P04233 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CD74P04233 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.3□□□□□ -1.56
CD74P04233 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CD74P04233 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 AC092451.3-201ENST00000625067 1343 ntBASIC5.29□□□□□ -1.56
CD74P04233 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD74P04233 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CD74P04233 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.29□□□□□ -1.56
CD74P04233 RPS3AP38-201ENST00000435889 763 ntBASIC5.29□□□□□ -1.56
CD74P04233 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC5.29□□□□□ -1.56
CD74P04233 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.29□□□□□ -1.56
CD74P04233 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 OR9A1P-202ENST00000484361 945 ntBASIC5.29□□□□□ -1.56
CD74P04233 RN7SL284P-201ENST00000498823 275 ntBASIC5.29□□□□□ -1.56
CD74P04233 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 NATP-201ENST00000523491 878 ntBASIC5.29□□□□□ -1.56
CD74P04233 AC069240.2-201ENST00000550242 609 ntBASIC5.29□□□□□ -1.56
CD74P04233 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.29□□□□□ -1.56
CD74P04233 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC5.29□□□□□ -1.56
CD74P04233 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.29□□□□□ -1.56
CD74P04233 AP006587.6-201ENST00000582128 1091 ntBASIC5.29□□□□□ -1.56
CD74P04233 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.29□□□□□ -1.56
CD74P04233 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.29□□□□□ -1.56
CD74P04233 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 AL035417.2-201ENST00000603887 796 ntBASIC5.29□□□□□ -1.56
CD74P04233 AC019257.2-201ENST00000605539 497 ntBASIC5.29□□□□□ -1.56
CD74P04233 AC023206.1-201ENST00000605824 298 ntBASIC5.29□□□□□ -1.56
CD74P04233 AC012510.1-201ENST00000607946 759 ntBASIC5.29□□□□□ -1.56
CD74P04233 MRPL57P3-201ENST00000619218 176 ntBASIC5.29□□□□□ -1.56
CD74P04233 FKBP1AP4-201ENST00000631775 336 ntBASIC5.29□□□□□ -1.56
CD74P04233 MAPK10-350ENST00000641777 965 ntBASIC5.29□□□□□ -1.56
CD74P04233 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.29□□□□□ -1.56
CD74P04233 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CD74P04233 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CD74P04233 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms