Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 AL136531.3-201ENST00000624378 3658 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC005522.1-201ENST00000395416 346 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 FABP5P2-201ENST00000439042 408 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC104109.1-201ENST00000498563 436 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AC091965.3-201ENST00000506236 208 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AC096754.1-201ENST00000508904 818 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AC060775.1-201ENST00000518241 520 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 IGLV3-6-201ENST00000523937 250 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC012146.2-201ENST00000576545 416 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC105114.1-201ENST00000624795 1862 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 AP000866.6-201ENST00000638898 3579 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CHRNA1P02708 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.91□□□□□ -1.3
CHRNA1P02708 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CHRNA1P02708 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.91□□□□□ -1.3
CHRNA1P02708 AC091305.2-201ENST00000624049 1576 ntBASIC6.91□□□□□ -1.3
CHRNA1P02708 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.9□□□□□ -1.3
CHRNA1P02708 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.9□□□□□ -1.3
CHRNA1P02708 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.9□□□□□ -1.3
CHRNA1P02708 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 AC127070.3-201ENST00000503695 3263 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CHRNA1P02708 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CHRNA1P02708 SNORA21-201ENST00000362423 132 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 RNA5SP477-201ENST00000362639 119 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 SUGT1P2-201ENST00000379452 992 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 AL713922.1-201ENST00000416477 747 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 RPL36P18-201ENST00000419316 318 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC130360.1-201ENST00000425489 1117 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 NPM1P25-201ENST00000429734 854 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 CST12P-201ENST00000457644 362 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.9□□□□□ -1.3
CHRNA1P02708 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.9□□□□□ -1.3
CHRNA1P02708 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.9□□□□□ -1.3
CHRNA1P02708 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.9□□□□□ -1.3
CHRNA1P02708 OR5H7P-201ENST00000514084 930 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 IGKV1D-22-201ENST00000518953 324 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 AC130365.2-201ENST00000525882 1201 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.9□□□□□ -1.3
CHRNA1P02708 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.9□□□□□ -1.3
CHRNA1P02708 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.9□□□□□ -1.3
CHRNA1P02708 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.9□□□□□ -1.3
CHRNA1P02708 PRELID3BP3-201ENST00000584963 545 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC008521.2-201ENST00000591021 259 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC100767.2-201ENST00000604840 693 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AL591167.1-201ENST00000607321 456 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AL008723.3-201ENST00000608926 449 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC022106.1-201ENST00000612834 766 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AC073862.4-201ENST00000622982 854 ntBASIC6.9□□□□□ -1.3
CHRNA1P02708 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.9□□□□□ -1.3
CHRNA1P02708 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CHRNA1P02708 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CHRNA1P02708 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms